Gene Apre_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0044 
Symbol 
ID8396791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp53524 
End bp54279 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content40% 
IMG OID644994381 
ProductABC transporter related 
Protein accessionYP_003151820 
Protein GI257065564 
COG category[R] General function prediction only 
COG ID[COG1101] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGAAA TTAAAAATAT TTCCAAAACT TTCAACATAG GCACAAGTGA AGAAAATACA 
ATATTTAAGG ACTTCTCCCT AAAGATCGAA GAAGGCCTTG CTACAACCAT CATAGGACCT
AATGGCTGCG GTAAGTCAAC CTTGATGAAT CTAATAAGCG GAAGCCTTCC TCTAGATTCA
GGACAGATTT TAGTAAATGG GGTAGAGATC AGCAAACTTA GCGAGGAAAA AAGAGCAAAA
TATATGGGCA AGGTCAACCA AGATCCCAAA GACGGGGTGG CGACCAACCT AGATATCTAC
GAAAATATGG CCCTAGCCCT AAAAAAGGGA GAGAAATTCG GCCTAAGATC TCTTAAGAAA
AGCTCTAATA CAGAAGAAAT AGTAAGAAGA CTTAAGAAGT TAAATCTAGG CCTTGAAAAC
AAACTCCATA CCAAGACAGA CCTGCTTTCT GGAGGACAAA GACAATCCCT AGCCCTTCTT
ATGGCGACAG CTAAAAAGCC GGACCTCTTA TTATTAGACG AGCACACAGC AGCCCTTGAC
CCAAAGACCA GTCGAAACAT AATGGACATG ACAAGAAGCC TTATCGATAA GGAAAATATG
ACAACCCTCC TAATCTCCCA CAACCTAAGA GACGTTGTCA AATACTCTGA TAGGATAATC
ATGCTAAACA AAGGAGAAAT TGTCCTAGAC CTTAGAGCAA AGGACATCAC AGAAGACGAC
CTAGTCAAAG CCTATAAGGA AAAATTAGGA GAATAA
 
Protein sequence
MLEIKNISKT FNIGTSEENT IFKDFSLKIE EGLATTIIGP NGCGKSTLMN LISGSLPLDS 
GQILVNGVEI SKLSEEKRAK YMGKVNQDPK DGVATNLDIY ENMALALKKG EKFGLRSLKK
SSNTEEIVRR LKKLNLGLEN KLHTKTDLLS GGQRQSLALL MATAKKPDLL LLDEHTAALD
PKTSRNIMDM TRSLIDKENM TTLLISHNLR DVVKYSDRII MLNKGEIVLD LRAKDITEDD
LVKAYKEKLG E