| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0043 |
|---|
| Symbol | |
|---|
| ID | 8396790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 52662 |
|---|
| End bp | 53531 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644994380 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_003151819 |
|---|
| Protein GI | 257065563 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4120] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.963469 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCT TACTATCATC ACTAGGAGCA AGTATAGAAA TAGGACTAAT ATTTGCAATC
CTTGCCATGG GCTACATGCT TAGCTACAAA TTCTTAAAAT ATTATGACCT CTCGCTCGAA
GGAACCTATC CTTTGGGAGC TTTTGTTGCA GCAGTTCTAA TTCAGAAGGG CCTGGGTCCT
TATCTTGGAA TCTTGGGAGC TATAATATGC GGTGGAGTCG GAGGATGTCT GACCTACTTT
TTCTACAAAA AGATCAAGGT AGACCCACTT CTTTCAGGAA TCCTAACCCT AACCATCCTT
TATTCCATAA ACTTAAGGAT AGGAGGGGCA AGTAATATCC CTATAGCAGG AAATCCAAAT
ATCTTTGGGG CCCTTCCCAA ATGGCCAATC CTACTTGTCC TAACCCTAGT AATCAAACTT
GCAATCGACT ATTACCTAAG AAGCGAGACA GGCTACCTAC TTAAAATTAC AGGCAATAAT
AGAAAACTTG TCAAACAATT AGGTAAAAAT CCTGATAACT TTATCATGGT GGGGCTCATC
CTATCAAATG CCCTCATAGG TCTAAGTGGA GGCCTTATGG CCAACTACCA AGGCTTTGCC
GATATACAGA TGGGAACAGC CATGATAGTG ACAGGTCTTG CCTCAATTAT TATAGGAGAT
ACCTTGATGA AATCTAGAGA TAAGCTTAGA GATACTTCAA GGGCAATACT TGGAGCAATT
GTCTATAGGA TTATATCAGG CCTTGCTATT TATCTGGGAC TAAATCCAAA CGACCTAAAG
CTTGTGACCG CTCTAATTGT TATAGCCTTT ATTTCCTACA ATAATTACCT AGCCAATATA
AAATACAAAA GGATGGTTAA AAATGCTTGA
|
|---|
| Protein sequence | MTGLLSSLGA SIEIGLIFAI LAMGYMLSYK FLKYYDLSLE GTYPLGAFVA AVLIQKGLGP
YLGILGAIIC GGVGGCLTYF FYKKIKVDPL LSGILTLTIL YSINLRIGGA SNIPIAGNPN
IFGALPKWPI LLVLTLVIKL AIDYYLRSET GYLLKITGNN RKLVKQLGKN PDNFIMVGLI
LSNALIGLSG GLMANYQGFA DIQMGTAMIV TGLASIIIGD TLMKSRDKLR DTSRAILGAI
VYRIISGLAI YLGLNPNDLK LVTALIVIAF ISYNNYLANI KYKRMVKNA
|
|---|
| |