Gene Apre_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0038 
Symbol 
ID8396785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp46128 
End bp47330 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content38% 
IMG OID644994375 
ProductNa+ dependent nucleoside transporter domain protein 
Protein accessionYP_003151814 
Protein GI257065558 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1972] Nucleoside permease 
TIGRFAM ID[TIGR00804] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.07116e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTGA TCTTGAACCT TCTGGGTATA GTTATTGTAA TAGGATTTAT GTTTTTAATA 
TCTATGAACA GGAAGGCTGT AAAAGTTAAG GGGATTTTCA CAGCTCTTTT AGCTCAATTT
ATAATAGCAG GCCTTCTTGT GAAACTCCCT CAAGGAAGAG CGGCTATAGG AGCTGTTAGT
AAGGCTGTAG AAAAGGTTTT ATCCTATGGT AGCGAGGGAA TCCAATTTGT TTTTGGATCT
TTGGGAGATC CAGCAGCTGC ATCAGGATAT ATATTTGCCT TTCAAACCTT GACCAATATT
ATATTTATAT CATCTTTAGT TGCAGTCTTG TTCTATACTG GAATTTTGGG TTTTGTAGTA
TCAAAGATAG GTTGGCTCAT AGGAAAATTA TTTAAAACAT CAGAGGTTGA GTCCTTTGTA
GCAGTTGCTA ATATGTTCTT AGGTCAAACT GACTCACCAA TCCTTGTAGC AAAATATTTA
AACTTCATGA CAGAAAGTGA AGTAATGCTA GTCCTCGTTT CAGGAATGGG ATCAATGTCA
GTATCAATTA TTGCAGGCTA TGTTGCCTTG GGAATCCCTA TGGAATCCTT GCTTATAGCA
TCTACCATGG TTCCAGTTGG CTCAATCCTT CTATCCAAAA TTGTATGCCC ACAAACAGAG
GAAATCCAAG AGCTCGGTGA AGTGAAGATG GACAGGAAGG GCAACAACGA AAACGTCCTA
GATGCCTTGG CAAGTGGAGC CCTCGATGGA ATGAATATGG CTATGGCAAT AGGAGCAAGC
CTTATAGCTA TAATTTCTAT AGTAGCTTTG ATAAATGGGA TTTTGGGCAT ATTTAATATT
TCTTTGGAGA CTATCCTATC TTATGTATTT GCACCAATGG GTTACTTGAT GGGACTTGAA
GGTAAGGAAG TCTTTACAGC AGGTGAGCTT TTAGGTTCAA AATTAATCTT AAACGAATTC
GTAGCCTTTG GCAAGCTTGG TCCAATGCTT GCTACTATGA GCGAGAGAAC AGGTCTTATG
CTTGCAGTAT CTCTTGCAGG ATTTGCTAAT GTAAGCTCAA TAGGAATTTG TATATCTGGT
ATATCAGTCC TATGTCCAGA AAAAAGACCT GTTCTTGCAA AGCTTGCCCT AAGGGCTATG
ATTGCGGGAT TCTGTGTCAG CGTACTATCA GCTTTAATAG TTGGTATTTG GTTATTATTC
TAA
 
Protein sequence
MKLILNLLGI VIVIGFMFLI SMNRKAVKVK GIFTALLAQF IIAGLLVKLP QGRAAIGAVS 
KAVEKVLSYG SEGIQFVFGS LGDPAAASGY IFAFQTLTNI IFISSLVAVL FYTGILGFVV
SKIGWLIGKL FKTSEVESFV AVANMFLGQT DSPILVAKYL NFMTESEVML VLVSGMGSMS
VSIIAGYVAL GIPMESLLIA STMVPVGSIL LSKIVCPQTE EIQELGEVKM DRKGNNENVL
DALASGALDG MNMAMAIGAS LIAIISIVAL INGILGIFNI SLETILSYVF APMGYLMGLE
GKEVFTAGEL LGSKLILNEF VAFGKLGPML ATMSERTGLM LAVSLAGFAN VSSIGICISG
ISVLCPEKRP VLAKLALRAM IAGFCVSVLS ALIVGIWLLF