Gene Apre_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0037 
Symbol 
ID8396784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp44943 
End bp46118 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content38% 
IMG OID644994374 
Productphosphopentomutase 
Protein accessionYP_003151813 
Protein GI257065557 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1015] Phosphopentomutase 
TIGRFAM ID[TIGR01696] phosphopentomutase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.00156e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA AAAAGAGAGT ATTTTTAATA GTTTTAGACT CTGTGGGCAT AGGCGAAATG 
CCAGATGCTC ACAAATATGG CGATGAGGGT AGCAATACCC TTGCTGCTAT TGTTAAAAGC
GATAAATTTA AGGCAGATAA TTTAGCAAAA CTTGGATTTT TCAATATCGA AGGTGTTGAT
TGCAAGGAAG ATGTATTAAA TCCTATAGGA TCTTTTGCAA GACTTGCCGA AGCTTCAAAT
GGCAAGGACA CAACTACAGG TCATTGGGAG ATGGCAGGCA TCATTTCAGA AAAACCTTTC
CCTACCTTCC CAAATGGTTT TCCAGAAGAT TTTCTAGAAG AGTATTCTAA AAGAGTTGGT
AGAAAGATTA TCTGCAACAA GCCATATTCT GGAACAGAGG TTATTGAAGA TTATGGTAAG
GAACACTTGG AAACAGGAGC TCTTATAGTC TATACATCAG CAGACTCAGT CTTTCAGGTA
GCAGGCCACG AAGATGTAGT TAGCCTTGAA GAATTATATC GCTGTTGTGA GATTGCAAGA
GATATGCTTC AGGGAGATTT GGCAGTAGGT AGGGTTATAG CAAGGCCTTT TGTAGGCGAG
CTTGGTTCTT TTGAGAGAAC TAGAAACAGA CACGACTACG CCCTAACTCC AACAGGCCCA
ATCATTATGG ATGATTTGGT AAAAAATGGC TATGACTCTA TAGGAGTTGG CAAGATTTAT
GATATCTTCG CAGGGCAGTC AGTCCTTGAA ACTTACAAGA TGGAAGACAA CATCGATGGA
ATGAATATAA CCCTTGATTT GTGTGATAAG GATTTCAATG GCTTGTGCTT CGTAAATTTA
GTTGATTTTG ACATGATTTA TGGTCATAGA AATGATGTAG ATGGTTATGC CAAGGCCTTT
GCTGATTTTG ATAAGCAATT GGGAGAGATG CTTCCTAAAC TTAGGGAAGA TGACATTGTA
ATTATCACAG CAGATCATGG ATGTGACCCA TCAACCCCAT CCACCGACCA CTCCAGGGAA
TATGTTCCAA TGTTAATTTT TGGAGATAAG ATTAAATCTG GAGTTGACCT AAAGACAAGA
AATACTTTTG CAGATATTGG AAAGACTATT GCCGATATAT TTGAAATCGA CTCAGCAATT
CCAGGCGAAA GTTTTTATGA AAAAGTTAAA AAATAG
 
Protein sequence
MKNKKRVFLI VLDSVGIGEM PDAHKYGDEG SNTLAAIVKS DKFKADNLAK LGFFNIEGVD 
CKEDVLNPIG SFARLAEASN GKDTTTGHWE MAGIISEKPF PTFPNGFPED FLEEYSKRVG
RKIICNKPYS GTEVIEDYGK EHLETGALIV YTSADSVFQV AGHEDVVSLE ELYRCCEIAR
DMLQGDLAVG RVIARPFVGE LGSFERTRNR HDYALTPTGP IIMDDLVKNG YDSIGVGKIY
DIFAGQSVLE TYKMEDNIDG MNITLDLCDK DFNGLCFVNL VDFDMIYGHR NDVDGYAKAF
ADFDKQLGEM LPKLREDDIV IITADHGCDP STPSTDHSRE YVPMLIFGDK IKSGVDLKTR
NTFADIGKTI ADIFEIDSAI PGESFYEKVK K