Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0036 |
Symbol | |
ID | 8396783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 44266 |
End bp | 44934 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644994373 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_003151812 |
Protein GI | 257065556 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000477173 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACA AAGAAATCTA CGCTCACATA GACCACACCC TATTGAAGGC TTTTGCTAAA TGGGAAGATA TAGAAAAGCT CTGTGATGAG GCAGTAAAAT ATCAAACGGC TTCAGTTTGT ATCCCACAAA CATATATAAA AAGAGTTAAG GAAAAATATG GTGATAAACT AACAATTTGT ACAGTAATCG GCTTCCCTCT AGGATATAAT CTAACAGAAT CAAAGATAGT AGAAGCAGAA CAATCCCTTG CCAATGGTGC AAGTGAGATA GATATGGTTG TAAATATCTC AGATGTTAAA AATGGAGACT ACGAGAAGGT AGAAAAGGAG ATAAGAGCTA TCAAGGAAGC TATAGGAGAT AAAATCCTTA AGGTGATTAT CGAAACTTGC TATCTTACAG AGGAAGAAAA AATAGCTATG TGTGAAGCTG TTACCAAGGC AGGAGCTGAT TACATCAAGA CATCTACAGG CTTTGGTACA GATGGGGCTA GGATGGAAGA TGTAATCCTA TTTAAAGACC ACATTGGAGA AAATGTTAAA ATAAAAGCAG CTGGTGGAGT TAAAACAAAA GAAGACCTAG TAGCCTTTAT AGAAGCAGGT TGCGACAGGA TAGGAACAAG CTCAGCTATA AAGATGCTTA AGGGCGAAGA AAATAAGTCA GATTATTAG
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Protein sequence | MENKEIYAHI DHTLLKAFAK WEDIEKLCDE AVKYQTASVC IPQTYIKRVK EKYGDKLTIC TVIGFPLGYN LTESKIVEAE QSLANGASEI DMVVNISDVK NGDYEKVEKE IRAIKEAIGD KILKVIIETC YLTEEEKIAM CEAVTKAGAD YIKTSTGFGT DGARMEDVIL FKDHIGENVK IKAAGGVKTK EDLVAFIEAG CDRIGTSSAI KMLKGEENKS DY
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