Gene Apre_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0035 
Symbol 
ID8396782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp43275 
End bp44069 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content34% 
IMG OID644994372 
Producttranscriptional regulator, DeoR family 
Protein accessionYP_003151811 
Protein GI257065555 
COG category[K] Transcription
[G] Carbohydrate transport and metabolism 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000906536 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAA AAGACGAAAG ATTAAATAAA ATAATAAGCA TAGTCAAGAA TAAAAACGGA 
TCTTCCATCA AGGAATTGGC AAGCGACTTG TCAGTCTCTG AGATGACTAT AAGAAGGGAT
ATAAAGATTC TTGAGGATAA TAACATTATA GAGGTCTACC ATGGAGCTGT TGTTTATAAC
CCTTCCTTGG ATAACCCGAC TCTCTCCCAA ACTGAGTCGG ATTATGACCT AGACCAAAAT
TTGAAATTAA ACAATAGGCA AAAAGATTTG ATTGGAAGAA GGGCTTCTAG TTTAATTAAC
GATGGAGATA TTGTAGTAAT AGATACTGGA ACTACTACTG ATAAGCTTTC TAAGTATATT
TCTAATGATA TTTCTTCAAC TTGTCTTGTT TTCTCATCAA ATAACTTCCT GAATTTGATG
TATAAGGATA ATATCGACCT AATCCTTGCG GGAGGATTTT TCCACAGAAA TACAGGGATG
TTCGAATCAC AAGCAAGCCT TAATGTTATA GAAAACACAA GAGCCAACAA GGTCTTCCTA
TCAGCAGCCG GAGTACATAA AAATTTGGGC ATAACTTGTG CCAACTCCTA CGAGCTAGCA
ACCAAAAAGT TAATTATAAA AAATTCTCTA GAGGTAATTT TGCTCGTAGA CTCAAGCAAG
TTCGATGCTG TAAAGGCTGT TCATTTTTGC GAGCTTGATG ATATAGATAT TGTTGTAACT
GATAAAAATA TAAGTAGAGA TTGGCTTAGC TATTTAGAAG AGAAAAATAT AAGAGTGATA
ATAGCTGATA AATAA
 
Protein sequence
MAKKDERLNK IISIVKNKNG SSIKELASDL SVSEMTIRRD IKILEDNNII EVYHGAVVYN 
PSLDNPTLSQ TESDYDLDQN LKLNNRQKDL IGRRASSLIN DGDIVVIDTG TTTDKLSKYI
SNDISSTCLV FSSNNFLNLM YKDNIDLILA GGFFHRNTGM FESQASLNVI ENTRANKVFL
SAAGVHKNLG ITCANSYELA TKKLIIKNSL EVILLVDSSK FDAVKAVHFC ELDDIDIVVT
DKNISRDWLS YLEEKNIRVI IADK