Gene Apre_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0030 
Symbol 
ID8396777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp36092 
End bp38596 
Gene Length2505 bp 
Protein Length834 aa 
Translation table11 
GC content34% 
IMG OID644994367 
ProductATPase AAA-2 domain protein 
Protein accessionYP_003151806 
Protein GI257065550 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATA TATATTCACT AAAGGCATCA ATGGCGATTA AGGAAGCCAG AAACCTCGCC 
CTCCTCAATA AAAATCAAGA AGTAACAGAC CTTCATCTAC TAAAGTCTGT AACGGATCAA
GAAAACCATG TCCTAGATAC AATGCTTGAG GAATTTTCTG TAGATAAAGA TAACTTAACT
GATGAAATAA CAAAAGCTAT AGGAAAATTA AGGTCAAATG ATGGACTTAG CAAGCTCTAT
TTTTCAAGAG ATTACCAACG TACCTTGCTA CTTGCCAAGG AAAATGCCAA GAAAAGATAC
GCTGAGAAAA TAACTACAAG TCATCTTTTT CTAGCATTCT TTGATTTAGA AAAGACTACT
AGCAAACATA TATTAGAAAA AGTTGGCCTA AGTCATGAAA AATGTGAACA ATATCTTGTA
AATAAAGAAA AGGAAGTAGA AAATAGCGAA CGATTTAGCG AAAAAATAGG AGATCTCATC
GATAAATATG GGATAGACCT TACCAAAAGA GCTAAAGAAG GTAAAATTGA TCCGGTTATA
GGGATGGATT ATGAAGTAGA TAGGCTATCT GAAATTCTAA CCAGAAGGAT AAAAAACAAC
CCTATCCTAA TAGGTGAGCC TGGAGTTGGT AAATCTGCAG TTGTAGAGGG ACTGGCTCTA
AAGATTGCCC AAGGAGATGT GGTAGATTTT CTAAAAGATA AGATAATATT TTCGTTAAAT
GTATCAAGCG TATTGGCAGG CACAGGTTTA AGAGGTGAAT TTGAATCAAG AGTTAAAGAT
TTGATGGACA TAGTAACCTC GTTTGAAGGA AAAATCATCC TATTTATAGA CGAGATTCAC
ACAATTGTTG GAGCAGGGAG CTCTTCAGGC GGGATTGATA TTTCAAATAT CATAAAACCT
AAACTATCCA GAGGAGAAAT AACTATAATA GGAGCTACAA CTGTTGCTGA ATACAGGTCT
CATATAGAAA AAGATGGGGC GCTTGAACGT CGTTTCCAAA AGATTTTGAT AAAAGAGGCA
AGTATAGAAG AGTCTTATGA TATTCTTCGT GGTATAAAAA CTAACTACGA GAATTTTCAC
AATCTGATAA TAACAGATGA GGCGATAAAG GCTTGTGTAG ACCTATCTGA TAGGTATATA
ACTGACAGAA AGCTACCTGA TAAGGCGATA GACCTTATGG ATGAGGCGGC ATCAATGCTT
AAAAATAAGC TTGAAAATAC GCCGGATAGT CTAGATGATT TAAGAGAAGA TATTCTAGAA
TTGGAAGAAA GCCTACAGCT TAAAGCTGAC GATAAGAAGG AAAACAAGTT AGATGAGCTA
AAGAAGCTTT ACGACAAGGA TTTAGAAATA AAACAAGAAG AAACAGAAGA TTTAAGAGAT
CTAAGAAGGA TAAGAAGCGA TATAAGAGAG CTTGTATTTA TCAAAAAAAG ATTACTAAAT
GAAGATAAAT TCGAGGAATA TACTAAAATT ACTAAGGTAA AACTTCCGGA GCTTAAAAAA
GAAGAGAAAT CCTACCTAAA CAAAAAATAT GAATTTGTCA AAATAGAAAA ACTTGAAGAA
AGTCATATCA AAACGCTGAT ATCTAGGATA ACTAAGATAC CAGTAGAGGA TTTGAATCAA
GATAGGAAGG AAAAAATCTT AAATATAGAC AAGGCTCTGG GTAAAAAAGT AATAGGCCAA
CAAGAAGCTG TAGAGAAGAT ATCAAATGCA ATAATAAGAA CAGCTGTTGG CATGAAAAAT
AGGCACAAGC CAATAGGGAC ATTTCTTTTT ACAGGAAATA CAGGACTTGG TAAGACCTAT
TTGGCAAAGG TTCTGGCTGA TACCCTCTAC GAAGGGGAAG AAAGCCTAAT AAGATTTGAC
ATGAGTGAGT ATATGGATTC AAATTCCACA ACTAAGTTTA TTGGAGCTCC TCCAGGATTT
GTCGGTTATG AAGAAGGTGG CCAGCTTACT GAAAAAGTGA GGATCAATCC TTATTCAGTA
ATTCTATTTG ATGAGATAGA AAAGGCTAAC AAACAAATCT TTGACATCCT ACTTCAAATA
CTCGATGAGG GGAGACTAAC TGATAATAGA GGCATAACCA TAGACTTTAC CAATACTATT
ATAATTTTGA CATCTAATAT ATTGGCCAAG GAAGATGACA GCGATCTATA TAAGCATGAA
CTTTACCAAT ACTTTAAGCC TGAATTTATC AATAGGCTTG ATGCAATAGT TAAGTTTAAT
ACCTTATCTT ATGAAGATCT TATGGAAATC ACAAAGATTT ACCTAGAAGA AGTTAAAAAT
GATTTTGGGG AAATCGGAGT AAACTTTGCC TACACAAATG AAGTCATCGA AAAAATAGTA
GACCTCTCAG ATTATGAAGA ATTTGGGGCT AGAGAGATTA GAAGAGTGGT TGATGATAAG
ATAGTAACCA TGGTTTCTAG AAAAATCTTA CAAGATGACT TGGATAGTAC AAATGTGCTT
ACAATTATGT TAGAGGATGA TGAATTTTCC TTTGACATTA TGTAA
 
Protein sequence
MKDIYSLKAS MAIKEARNLA LLNKNQEVTD LHLLKSVTDQ ENHVLDTMLE EFSVDKDNLT 
DEITKAIGKL RSNDGLSKLY FSRDYQRTLL LAKENAKKRY AEKITTSHLF LAFFDLEKTT
SKHILEKVGL SHEKCEQYLV NKEKEVENSE RFSEKIGDLI DKYGIDLTKR AKEGKIDPVI
GMDYEVDRLS EILTRRIKNN PILIGEPGVG KSAVVEGLAL KIAQGDVVDF LKDKIIFSLN
VSSVLAGTGL RGEFESRVKD LMDIVTSFEG KIILFIDEIH TIVGAGSSSG GIDISNIIKP
KLSRGEITII GATTVAEYRS HIEKDGALER RFQKILIKEA SIEESYDILR GIKTNYENFH
NLIITDEAIK ACVDLSDRYI TDRKLPDKAI DLMDEAASML KNKLENTPDS LDDLREDILE
LEESLQLKAD DKKENKLDEL KKLYDKDLEI KQEETEDLRD LRRIRSDIRE LVFIKKRLLN
EDKFEEYTKI TKVKLPELKK EEKSYLNKKY EFVKIEKLEE SHIKTLISRI TKIPVEDLNQ
DRKEKILNID KALGKKVIGQ QEAVEKISNA IIRTAVGMKN RHKPIGTFLF TGNTGLGKTY
LAKVLADTLY EGEESLIRFD MSEYMDSNST TKFIGAPPGF VGYEEGGQLT EKVRINPYSV
ILFDEIEKAN KQIFDILLQI LDEGRLTDNR GITIDFTNTI IILTSNILAK EDDSDLYKHE
LYQYFKPEFI NRLDAIVKFN TLSYEDLMEI TKIYLEEVKN DFGEIGVNFA YTNEVIEKIV
DLSDYEEFGA REIRRVVDDK IVTMVSRKIL QDDLDSTNVL TIMLEDDEFS FDIM