Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0004 |
Symbol | |
ID | 8396751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 3184 |
End bp | 4263 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644994341 |
Product | DNA replication and repair protein RecF |
Protein accession | YP_003151780 |
Protein GI | 257065524 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGATCA AAGATTTAAA GTTAAATAAT TTTAGAAATT ATTTTTATGA AAATGTAGAA TTTAACAAGG ACTCCAATAT CTTCATTGGG GATAATGCCC AGGGGAAGAC CAATCTTTTA GAAAGTGTCT ATTATTTGGC TAACGCTTCA AGCTTTAAGA AGATTAGGGA TAAGGATATA GTAAGGTTTG GCCAAAGCCA GATGAAGCTT GCTGGCACTA TAAGAAAGGG CAGGTCTTTT AAGGAAGTTT TCATAGAAGT AAAGGATAAT GATAAGAGTA TTTTCGTAAA TGGAGTAAAA TATGATAGGA GGAAAGATTT AAGATCTCTT TTCAAGATTG TCTTATTTAC TCCAGAAGAT CTTGGAATAA TTAAGGATGG GCCAAATCGT AGGAGAGATT TAATCGATGA AATCATAGAA GAAATTGATT TATCCTATAA GGCCAACAAA AGAGATTACG ATAAGATTCT CTATCAAAGA AATAAGCTTT TGAAAAAACA AAAAGCTCCC TACTTTAAAG AACAACTAGA GGCTTTCGAT AAGTCTCTTA CAAAGCTTTC ATACAAGATA TATAAGACTA GGGATAAATT TATTAAAATT GTTGATAAAT TTGCTAGTGA ATTTCACTCA TCTCTAACAG AGAATAAGGA AGAGTTAAAA CTAAGCTATA AGGCTGATAT TGAAGCTAAA AGTCTCACAG AATATGAGGA AGTTTTTAGG TCGGCGAGAG ACTTAGATTT TAAATACCTT ACTAGCCAAA GAGGAATCCA TAGGGATGAG ATTGAAATAA GTATAAATGG TAAAAATACC AAAAGCTTTG CTTCTCAAGG TCAACAGCGT TCAGCTATCT TAAACATTAG ACTTGCGGAA GTAAGGTTGA TTAAGGAAGT GACAGGAGAT GAGGCTGTCA TTTTGTTTGA CGATGTCTTT TCAGAGCTAG ATGAGAAAAG GTCTATGTTT TTGTTAGAAA ACCTCAAGGG CTTTCAGACA ATAATAACTG CAACCAATAC CAAGAGTTTG GAGTATGTAG ATAGGGAAAA GATTTCATAT ATCTTAGATG GAAAGATTAG AAAGGAATAG
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Protein sequence | MRIKDLKLNN FRNYFYENVE FNKDSNIFIG DNAQGKTNLL ESVYYLANAS SFKKIRDKDI VRFGQSQMKL AGTIRKGRSF KEVFIEVKDN DKSIFVNGVK YDRRKDLRSL FKIVLFTPED LGIIKDGPNR RRDLIDEIIE EIDLSYKANK RDYDKILYQR NKLLKKQKAP YFKEQLEAFD KSLTKLSYKI YKTRDKFIKI VDKFASEFHS SLTENKEELK LSYKADIEAK SLTEYEEVFR SARDLDFKYL TSQRGIHRDE IEISINGKNT KSFASQGQQR SAILNIRLAE VRLIKEVTGD EAVILFDDVF SELDEKRSMF LLENLKGFQT IITATNTKSL EYVDREKISY ILDGKIRKE
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