Gene Apre_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0004 
Symbol 
ID8396751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp3184 
End bp4263 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content33% 
IMG OID644994341 
ProductDNA replication and repair protein RecF 
Protein accessionYP_003151780 
Protein GI257065524 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATCA AAGATTTAAA GTTAAATAAT TTTAGAAATT ATTTTTATGA AAATGTAGAA 
TTTAACAAGG ACTCCAATAT CTTCATTGGG GATAATGCCC AGGGGAAGAC CAATCTTTTA
GAAAGTGTCT ATTATTTGGC TAACGCTTCA AGCTTTAAGA AGATTAGGGA TAAGGATATA
GTAAGGTTTG GCCAAAGCCA GATGAAGCTT GCTGGCACTA TAAGAAAGGG CAGGTCTTTT
AAGGAAGTTT TCATAGAAGT AAAGGATAAT GATAAGAGTA TTTTCGTAAA TGGAGTAAAA
TATGATAGGA GGAAAGATTT AAGATCTCTT TTCAAGATTG TCTTATTTAC TCCAGAAGAT
CTTGGAATAA TTAAGGATGG GCCAAATCGT AGGAGAGATT TAATCGATGA AATCATAGAA
GAAATTGATT TATCCTATAA GGCCAACAAA AGAGATTACG ATAAGATTCT CTATCAAAGA
AATAAGCTTT TGAAAAAACA AAAAGCTCCC TACTTTAAAG AACAACTAGA GGCTTTCGAT
AAGTCTCTTA CAAAGCTTTC ATACAAGATA TATAAGACTA GGGATAAATT TATTAAAATT
GTTGATAAAT TTGCTAGTGA ATTTCACTCA TCTCTAACAG AGAATAAGGA AGAGTTAAAA
CTAAGCTATA AGGCTGATAT TGAAGCTAAA AGTCTCACAG AATATGAGGA AGTTTTTAGG
TCGGCGAGAG ACTTAGATTT TAAATACCTT ACTAGCCAAA GAGGAATCCA TAGGGATGAG
ATTGAAATAA GTATAAATGG TAAAAATACC AAAAGCTTTG CTTCTCAAGG TCAACAGCGT
TCAGCTATCT TAAACATTAG ACTTGCGGAA GTAAGGTTGA TTAAGGAAGT GACAGGAGAT
GAGGCTGTCA TTTTGTTTGA CGATGTCTTT TCAGAGCTAG ATGAGAAAAG GTCTATGTTT
TTGTTAGAAA ACCTCAAGGG CTTTCAGACA ATAATAACTG CAACCAATAC CAAGAGTTTG
GAGTATGTAG ATAGGGAAAA GATTTCATAT ATCTTAGATG GAAAGATTAG AAAGGAATAG
 
Protein sequence
MRIKDLKLNN FRNYFYENVE FNKDSNIFIG DNAQGKTNLL ESVYYLANAS SFKKIRDKDI 
VRFGQSQMKL AGTIRKGRSF KEVFIEVKDN DKSIFVNGVK YDRRKDLRSL FKIVLFTPED
LGIIKDGPNR RRDLIDEIIE EIDLSYKANK RDYDKILYQR NKLLKKQKAP YFKEQLEAFD
KSLTKLSYKI YKTRDKFIKI VDKFASEFHS SLTENKEELK LSYKADIEAK SLTEYEEVFR
SARDLDFKYL TSQRGIHRDE IEISINGKNT KSFASQGQQR SAILNIRLAE VRLIKEVTGD
EAVILFDDVF SELDEKRSMF LLENLKGFQT IITATNTKSL EYVDREKISY ILDGKIRKE