Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_12710 |
Symbol | |
ID | 8375476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | - |
Start bp | 1440872 |
End bp | 1442860 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644994188 |
Product | predicted membrane protein |
Protein accession | YP_003151634 |
Protein GI | 256827675 |
COG category | [S] Function unknown |
COG ID | [COG4907] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.942677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 156 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGTGA AGTCAGCTGC CTTAGTGCAC ACCCCCCATC GTTCTGCACA CTCTAGCAAG CTCAGTCATC TCCTGCTTTT TTCGCTTGCG TTATTCACGC TCTTCATTGC TGTTCAGGCA ACGTTTCCGT CTACGGCGTG GGCGAAAGAT TTCAAGATGC CTCAGGTGGA TATCGTTGCA GACATGCAAA GCGATGGGTC GCTGCATGTT GTTGAAAAGC GTACCTTTGA TTTTGACGGA TCGTTCTCAG CAATTTGGTG GACATTCAAT AGCGGTAATA TCACCGTCAA TAGTATGTCT ATGACAAAAA CAACCCAGTG GACATCCGGA CCGGAGACGA GCACGGTAGA ACTTTCAGAA GTGCCTTTTC AAACCTCGTG GCGCAATGAA GGAGGGCCTG GAAAAGAGGC CTACTCAGTG GATAGCGTGA AGAATACGGT GTATGCCTTT TTCTTCGCAA CTAACGAGCA GCGCACCATC ACTATCGACT ACACCGTCGT TGATACCGTA GCGGTCTACG ATGATGGAGT TGATCTCTAT TGGCAATTTG TCGGAGACGG TTGGAGTGAA GCTTCCTCGA ATGTTACCTG TAAGATAAAT CTACCTGCAC CAGCTGGAAT AGCTGCGCAG CCCGGAAGCG ATGTCTATGC CTGGGGCCAC GGCCCAGCAA GTGGTACGGT TTCGTTTAAT GATGATGGAA CGAGTCTTAC CTATGCGATT TCCAAGGTTC CTTCGGGTTC GTTTGCTGAG GCACGAGTGG TCTTCCCGCG TGCATGGCTT GTCGATTTGC CACAGAATTA TGCGAATTAC CACCCCGGTG TCTCCCATCT TGACCAGGTG AAAGAAGAAG AAGAGAAGTG GGCTAATGAG GCTAATCTAG GGCGGGCATT AAACATCGCA TTTATTGCGG GTGTTGTGCT TCTTTGTGTG CTTGCTCTTT TGATTGCTTG GCGTTTGTAT CTTCGGTATG GCAAGGAATT CAAGCCAACT TTTACGGATA AATATTGGCG TGATGTACCT GATAAAGAGG TACATCCTGC GGTGATAGCG CGCCTGTGGA AGATGGGAAA GACAAACAAT TCTGAGCTAA CAGCAACTAT CATGCATCTG GCTAACGAAG GTGCCGTTAT TATTGCACGT GGTACCTATC CCAATGCAAA AGGTAAAGAA GTAGAAGATT TCTATCTCAC ACGCGTACCT GCCAAAGTTG AGCAGTTAGC CGACCCGATT GATCGGAAAG TCATTGAGTT TTTGTTTGAT AAGATTGCAC AGGGTGAAGA CGCTCTCTGG TTAGGAACTA TCAAACAGTA TGGCTCAGAC AATCCCAGCG CATACGATAA GCAGATTAGA TCGTGGCGCG GGCTGGTAAC CGCTGAAACA AACAGGCAGG AATACTTTGA GCAGTCTCAT AAGGGTACCC TCACGGCATT AAGGGGATTT GTTGTTATTG CTGCCTTTGG TGCGTCTTTC GTAACCGGGA ATTTCATTCC ACTTATTTGT GCGGTTCCGA CAGCGTTTAT TATTTTTATT ATTTCTTCAA AGATGGAACG TCGTACGCAG AAGGGAACTG ATACGTATGC ACGTTGTAAA GCATTACGTA ACTGGCTAAA GGACTTTTCT GCTATCGACG AGCGACCGCC GACTGATGTA AAGGTCTGGG GTGAATTCAT GGTATATGCC TATCTGTTTG GTGTTGCCAC CGAAACGATT GCTCAGTTGC GTGCAGCCTT CCCTGAGATG TTTGCCGAAG CCGAGACGGG AAGTGATTCC TCTCTTAACT GGTATACAAC GTGGTATGCA TACAATGCTG GTGCACACGG GGGATCTGCT GCGGATAGCT TTACGTCAGC TTTCGACACG ATGGTCAGTA ATACCGAAAG TGTGGTAAGT AGTGCCCTGT CGCCTTCATC GTCTGGTGGT GGTTTTGGCG GAGGGTTCTC CGGCGGCGGC GGAGGCGGTT TTGGCGGCGG CGGAGGCGGT GCGCGCTAA
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Protein sequence | MPVKSAALVH TPHRSAHSSK LSHLLLFSLA LFTLFIAVQA TFPSTAWAKD FKMPQVDIVA DMQSDGSLHV VEKRTFDFDG SFSAIWWTFN SGNITVNSMS MTKTTQWTSG PETSTVELSE VPFQTSWRNE GGPGKEAYSV DSVKNTVYAF FFATNEQRTI TIDYTVVDTV AVYDDGVDLY WQFVGDGWSE ASSNVTCKIN LPAPAGIAAQ PGSDVYAWGH GPASGTVSFN DDGTSLTYAI SKVPSGSFAE ARVVFPRAWL VDLPQNYANY HPGVSHLDQV KEEEEKWANE ANLGRALNIA FIAGVVLLCV LALLIAWRLY LRYGKEFKPT FTDKYWRDVP DKEVHPAVIA RLWKMGKTNN SELTATIMHL ANEGAVIIAR GTYPNAKGKE VEDFYLTRVP AKVEQLADPI DRKVIEFLFD KIAQGEDALW LGTIKQYGSD NPSAYDKQIR SWRGLVTAET NRQEYFEQSH KGTLTALRGF VVIAAFGASF VTGNFIPLIC AVPTAFIIFI ISSKMERRTQ KGTDTYARCK ALRNWLKDFS AIDERPPTDV KVWGEFMVYA YLFGVATETI AQLRAAFPEM FAEAETGSDS SLNWYTTWYA YNAGAHGGSA ADSFTSAFDT MVSNTESVVS SALSPSSSGG GFGGGFSGGG GGGFGGGGGG AR
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