Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_10070 |
Symbol | |
ID | 8375214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 1142060 |
End bp | 1143685 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644993929 |
Product | L-serine dehydratase, iron-sulfur-dependent, alpha subunit/L-serine dehydratase, iron-sulfur-dependent, beta subunit |
Protein accession | YP_003151380 |
Protein GI | 256827421 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00718] L-serine dehydratase, iron-sulfur-dependent, alpha subunit [TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000332749 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 0.0000000458611 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGGACC TTCATATATC AGATGTTTTG GGGCCCATTA TGATTGGCCC TTCATCAAGT CATACTGCTG GCGCACTACG TATCGCTATG ATGGCACGCC GTCTTTCTAC ATCAATTCCA ACCGCTGTTG AATTTCGATT GTATGGTTCC TTTGCTCATA CATATCGCGG ACACGGAACC GACCGAGCAC TGGTCGGCGG CATACTTGGC ATGGACCCTG ATGACCTGCG TATCCGCAAT TCGCTGCAGC TCGCGCAGGA AGCAGACATA GAGGTAACCT TCACTCCCCT TCCTGATGCG CCCTACGACC ATCCGAACAC GGTTGATGTG GTGATGAGCG ACGCGAGCGG ATCTGAAACG ATTGTGCGAG GTATTAGTAT TGGTGGCGGG GCGGCAACGC TCACCCGTAT CAACGGTGTT GATGTCAATA TCACCGGTGA ATGTACCAGC GTTATCATTC AGCAGCGTGA CACCGTTGGC GTGCTCGCAC ACATCACGCA AAGCATTAGC CATATTGGCG GCAATATCGC CACCCTCCGC TGCTATCGTG AACAACGCGG CGAAACAGCC TATACCGTAC TTGAAGTGGA TGGGTCAGTT CCTATTTCAG TATGCGAAGC CATTATGGGA CATCCCGGTA TTATGAGTAT TCGCGTTATA CCTGCTGCTG GCGGATCCAC TGCAAACACA ACAAATAAGC CTGATGAAGC AGCTGCCGAA CGCTTCCGAA CACTTGATTT TCCTACCGCG CACGCGCTTC TGGAATACTG CACCGCGCAT TCTCTTACCA TTGCGCAGGC TTTTCGCGCA CGAGAGGAAG CGCTTGGTGC CTCCCACGGT GAGTCGACCG ATATCGATGG TTACCTTGAT CGCGTGCTCG CAGTGATGCG CGCAGCAGCC ACCGAGCCAG CCGAACAGCC TATTACCGCT ATGGGCGGCC TTATTGGGGG CGAAGCACGC AAACTTGTCC TCAGACAGCA ATCTGGCAAA GCACTTATTT CGGGACAATT GGCTCGCGCG GCACGCTATG CCATGGCGGT ACTCGAAACG AATGCCGGCA TGGGCTGCAT TGTTGCCGCC CCTACCGCAG GGTCGTCAGG AGTAATCCCC GGCACCCTTC TTACCCTGCA AGATGAATGC GGATTCTCTG ATGAAGACAT GCGTGAAGCG CTGCTCTGCG CCGCAGCAAT TGGCTACCTT ATTACGCGTA ACGCTACCGT ATCGGGCGCT GAAGGCGGCT GCCAAGCCGA AATGGGGTCG GCAGCAGCCA TGGCGGCAGC AGCAGCAACT CAGCTAGGAG AAGGCAGCCC AGCCCAATGT TTTGACGCTG CCGGCAATGC CATTGCCAAC ATGCTTGGTT TGGTGTGTGA CCCCATTGCA GGCTTGGTGG AAGTTCCCTG CCAGAAGCGC AACGCTTCCG GAGCGGCTAA TGCCCTTATT AGCGCCGAGG TTGCTCTTGC TGGTGTAGTG AATCTCGTCG ACTTCGATCA AACGGTCGAT GCGATGTTCC ATGTCGGCCG CTCGCTTCCC TTTGAGCTAC GCGAAAGCGC TCTGGGAGGA ATGGCCGCCT GTCCGGCAGC TTGCGAATGG TGTGAAGGAT TCCGCAAGCG CGCTGAAACA AAGTAG
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Protein sequence | MQDLHISDVL GPIMIGPSSS HTAGALRIAM MARRLSTSIP TAVEFRLYGS FAHTYRGHGT DRALVGGILG MDPDDLRIRN SLQLAQEADI EVTFTPLPDA PYDHPNTVDV VMSDASGSET IVRGISIGGG AATLTRINGV DVNITGECTS VIIQQRDTVG VLAHITQSIS HIGGNIATLR CYREQRGETA YTVLEVDGSV PISVCEAIMG HPGIMSIRVI PAAGGSTANT TNKPDEAAAE RFRTLDFPTA HALLEYCTAH SLTIAQAFRA REEALGASHG ESTDIDGYLD RVLAVMRAAA TEPAEQPITA MGGLIGGEAR KLVLRQQSGK ALISGQLARA ARYAMAVLET NAGMGCIVAA PTAGSSGVIP GTLLTLQDEC GFSDEDMREA LLCAAAIGYL ITRNATVSGA EGGCQAEMGS AAAMAAAAAT QLGEGSPAQC FDAAGNAIAN MLGLVCDPIA GLVEVPCQKR NASGAANALI SAEVALAGVV NLVDFDQTVD AMFHVGRSLP FELRESALGG MAACPAACEW CEGFRKRAET K
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