Gene Ccur_10020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_10020 
Symbol 
ID8375209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp1137640 
End bp1138260 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content58% 
IMG OID644993924 
ProductLSU ribosomal protein L3P 
Protein accessionYP_003151375 
Protein GI256827416 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000402835 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.00000000318342 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCAACG CTATCTATGG AACCAAGCTG GGCATGACCC AGATATTCTC CGAAGACGAT 
GAAGTGGTTC CCGTCACCGT CATTCAAGCT GCGCCGAACA CCATCTGCCA GCTGAAGACG
AAGGAGACCG ACGGCTACGA AGCCGTTCAG CTCGGCTTCG GCGCGATCAA GCCCCAAAAG
GTAAACCGCC CTATGGGTGG CCACTTTGCC AAGCAGGGTG TTGACCCCGT TCGTCATCTG
CGCGAAGTGC GTGTTGAGGA TGCCTCTGCG CACAGCCTGG GCGAAAAGGT AACCGTTTCC
CTCTTTGCTG ATGCAAAGAA AGTTGACGTT ACCGCTACGT CTAAGGGTAA AGGCTTTGCC
GGTGTTATGC GTCGTTACAA CTTCCGCGGT GGCCCAGGTG GCCATGGTGC GCACTTCCAT
CGTGCACCGG GTTCCGTGGG CATGTGCGCG ACACCGTCGC GTGTGTTCAA GGGTCTGCGT
CTGCCCGGTC ACATGGGTGT TGACACGGTA ACCGTGAAGA ACCTCGACGT GGTCAGAATC
GACGAAGAGC AGAACCTTAT TTTGGTCAAG GGTGCGGTGC CCGGTGGCAA GAATGCCATG
GTCCGCGTGC GCCTGGCCTA G
 
Protein sequence
MINAIYGTKL GMTQIFSEDD EVVPVTVIQA APNTICQLKT KETDGYEAVQ LGFGAIKPQK 
VNRPMGGHFA KQGVDPVRHL REVRVEDASA HSLGEKVTVS LFADAKKVDV TATSKGKGFA
GVMRRYNFRG GPGGHGAHFH RAPGSVGMCA TPSRVFKGLR LPGHMGVDTV TVKNLDVVRI
DEEQNLILVK GAVPGGKNAM VRVRLA