Gene Ccur_09710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_09710 
Symbol 
ID8375178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp1112365 
End bp1113567 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content55% 
IMG OID644993893 
Producttranslation elongation factor 1A (EF-1A/EF-Tu) 
Protein accessionYP_003151347 
Protein GI256827388 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00485] translation elongation factor TU
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.20871e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value1.38274e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTAAGG AAAAGTTTGA GCGTACTAAG CCGCATGTAA ATATCGGCAC TATCGGTCAT 
GTTGACCACG GCAAAACAAC GCTGACTGCC GCTATTTCCA AGACCCTGTC CAGCAACGAC
GGGTCTCATG GCACTGCTCA TGCCGACTTT ACCGCGTTTG AGGATATCGA TAAGGCTCCT
GAAGAGCGCG AGCGCGGCAT TACCATTTCG ATTGCTCATA TCGAATACGA AACTGACAAA
CGTCACTATG CTCATGTTGA CTGCCCCGGC CATGCCGATT ACGTCAAGAA CATGATCACC
GGTGCTGCTC AGATGGACGG CGCTATTCTG GTTATCGCTG CTACCGACGG TCCTATGGCT
CAGACGCGTG AGCACATCCT GCTTGCTCGT CAGGTTGGCG TGCCCTACAT CGTTGTCTTC
CTGAACAAGT GCGACATGGT CGACGACGAA GAGCTCCTCG AGCTTGTTGA AATGGAAGTT
CGTGATCTGC TTAGCTCATA TGACTTCCCC GGAGACGAAA CTCCGATCAT CCGCGGTTCT
GCCCTGAAGG CTCTTGAGGG CGAAAAAGAA TGGCAGGATA AGATCTGGGA GCTTATGGAT
GCCGTTGACG AGTGGATCCC CACTCCGACC CGCGACACCG AAAAGCCCTT CCTGATGGCT
ATCGAGGATG TTATGACCAT CCCTGGTCGT GGTACTGTTG TAACGGGTCG TGTCGAGCGC
GGCGTTCTGC ATGTAGGCGA TGAACTCGAG ATTCTGGGTA TTCGCGAAAC GCAGAAGACC
ACCTGCACCG GCGTTGAGAT GTTCCGTAAG CTGCTCGACG AAGCTGAGGC TGGCGACAAC
ATCGGCGCTC TGTTGCGTGG CATCAAGCGC GAAGAAGTAG TACGCGGTCA GGTTCTTTGC
AAGCCTGGTA GCGTTACTCC GCACACTGAG TTCAAGGGTC AGATTTACGT TCTGACCAAG
GAAGAAGGCG GCCGCCATAC TCCGTTCTTT GACGGCTATC GTCCGCAGTT CTACTTCCGC
ACCACCGACA TCACTGGTGT GGTTCATCTG CCCGAGGGCA CCGAGATGGT TATGCCTGGC
GACAACGTGG AGATCAAGGG CGAACTTATT CACCCGGTCG CCATGGAGGA AGGCCTCAAG
TTCGCCATCC GCGAGGGTGG TCGTACGGTT GGTTCCGGCC GCGTAACCGA AATCATCAAG
TAG
 
Protein sequence
MAKEKFERTK PHVNIGTIGH VDHGKTTLTA AISKTLSSND GSHGTAHADF TAFEDIDKAP 
EERERGITIS IAHIEYETDK RHYAHVDCPG HADYVKNMIT GAAQMDGAIL VIAATDGPMA
QTREHILLAR QVGVPYIVVF LNKCDMVDDE ELLELVEMEV RDLLSSYDFP GDETPIIRGS
ALKALEGEKE WQDKIWELMD AVDEWIPTPT RDTEKPFLMA IEDVMTIPGR GTVVTGRVER
GVLHVGDELE ILGIRETQKT TCTGVEMFRK LLDEAEAGDN IGALLRGIKR EEVVRGQVLC
KPGSVTPHTE FKGQIYVLTK EEGGRHTPFF DGYRPQFYFR TTDITGVVHL PEGTEMVMPG
DNVEIKGELI HPVAMEEGLK FAIREGGRTV GSGRVTEIIK