Gene Ccur_08900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_08900 
Symbol 
ID8375098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp1021508 
End bp1022581 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content51% 
IMG OID644993812 
Productpeptide chain release factor 1 
Protein accessionYP_003151273 
Protein GI256827314 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000087001 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones113 
Fosmid unclonability p-value0.899711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAAA AGGAAAAGCT CGAAAAGATT ATTGAAGCGT ATCGCGATTT ACAGACGCGT 
ATGAGCGATC CAGCGGTTAT TTCAGATCAA AAAGAATATA ACCGCTTGGC GAAAGAGTAT
GCCCACCAAG GTCCACTTGC GACGGCAGCG CGTACGTATG TGCAGGATAT CGACGATCTC
GCCGAAGCTA AAGAAATGAT TTCCGATGCT GATATGCGGG AGTTTGCCCA GGAAGAGATT
ACGCGTATTG AAAACGAGCT TCCCGGTTTG GAAGATGACA TCAAGTTCAT GCTTATCCCA
GCTGATCCAG CAGATGATAA AGACATCATC GTGGAAATTC GTGCCGGTGC TGGTGGTGAC
GAGGCGGCGC TGTTTGCAGG CGATCTCTTT AAGATGTATT CGCATTTTGC CGATGTCAAA
GGCTGGAAAA TCGAAGTGCT GAACGCGTCT GCTTCAGAAG CGGGCGGCTA TAAGGAAATT
CAGTTCAAGG TGAAGGGCGA CAAAGTTTAT TCCGAAATGA AATTTGAAAG TGGCGTACAT
CGCGTGCAGC GGGTGCCAAA AACGGAAAGC CAGGGTCGTA TTCATACCTC GACGGCAACG
GTTGCTGTGC TTCCAGAAGC TGATGAAGTA GAAGTTGACG TGAAGCAGGA AGACCTGCGT
ATCGACGTGT ATCGTGCTGG TGGTCCGGGC GGGCAATGCG TTAATACGAC CGACTCAGCG
GTACGTATTA CTCATTTGCC AACCGGTTTG GTTGTGCAAT CACAGGATCA AAAAAGCCAG
CTGCAGAACA AGATTGCGGC GATGGCGGTA CTGCGCGCCC GCCTGTATGA AAAGATGCTG
GAAGAACAGC GTGCGGCTGA AGGTGCCGAA CGACGCGCTC AAATCGGTAC GGGCGATCGC
AGCGAAAAAA TTCGCACCTA CAACGGCCCG CAGGATCGCG TGACTGACCA TCGCATTGGG
TATAACGGTA CCTACAATGG CATTCTGATG AATGCTGGCG GCGCTGGTCT TGAAGATTTA
ATTACTGCGC TGCAGGCTGC CGATCGCGCT CAGAAGCTTG AGCAGGCTGT TTAG
 
Protein sequence
MLEKEKLEKI IEAYRDLQTR MSDPAVISDQ KEYNRLAKEY AHQGPLATAA RTYVQDIDDL 
AEAKEMISDA DMREFAQEEI TRIENELPGL EDDIKFMLIP ADPADDKDII VEIRAGAGGD
EAALFAGDLF KMYSHFADVK GWKIEVLNAS ASEAGGYKEI QFKVKGDKVY SEMKFESGVH
RVQRVPKTES QGRIHTSTAT VAVLPEADEV EVDVKQEDLR IDVYRAGGPG GQCVNTTDSA
VRITHLPTGL VVQSQDQKSQ LQNKIAAMAV LRARLYEKML EEQRAAEGAE RRAQIGTGDR
SEKIRTYNGP QDRVTDHRIG YNGTYNGILM NAGGAGLEDL ITALQAADRA QKLEQAV