Gene Ccur_08630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_08630 
Symbol 
ID8375071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp987306 
End bp988835 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content50% 
IMG OID644993785 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_003151247 
Protein GI256827288 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones105 
Fosmid unclonability p-value0.315329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGATA TGATGGTTGA GCGCGCATCG ACGACCGAAC AGTCCGATGC ATCTGAGATA 
TCTGAGGTAT CGAGTGTGTC CCCTAAAACG GCGGATAGTG CGTTGGCATC TGCGCGGAGG
CATGTGCTTC CGCTGCCCAT AAGTCCAAAA GGGTCACTAT TTGTTATGCT TGCCGCTTCA
TTTGTGACCT GCTCGGCACA GAGCATGCTT TCGGCGGCAC TTCCGTATAT CATGTCCGAC
TTTAACGTTG ATACGACACT CGCTCAGCTT TTAACCACCG GCTATTTCTA TGTGCTCGGT
ATCCTCAGTG TGCTGACAGC ATTCCTTATC AATTCGTTTG ATACCCGTAA GTTGTTTCTT
GCGGCGATGT GCTTCTTTGT GATGGGGTCA GGCATTGCTA TTTTTGCGCC GAACTATCCT
GTGCTTCTTG CTGCGCGCTT CCTGCAAGCT GGCGGCAATG GCATTATGAT CCCGCTGATT
CAGAATGTTG CCGTAGAGGT GTATCCGAAA GAACGTCACG GTTTTGCATT AGGCCTGGTT
GGTATGGTTA TTGGTTTTGC GCCAGTGCTT GGTCCGGTGC TTTCTGGTGC CATCGTGCAG
TTCTGGGGAT GGCGAGCGGT TTTTGATATC TTGGGTGGCC TTGGCGCAAT GGCATTGATT
GTTTCTGTGT TCACCGTGCA TAATTTTGGC GAGCATCATC ACGAGGTGCT CGATATTCGG
TCATGTCTGC TGTTTATTCC GGGCCTTATC ATCTTTATGG TTGGGGTTAC CTGTACTGAA
CAGCAGGGTC TGTATCAGTG GTTTAGTTAT TCGCTTGATC TGTTGGGTGC ATTTCTGATT
GTTGCCTTCT GTTATCGGCA GGCTCATATG GAACAGCCCC TGTTGCGTTT GTCTCTTTTC
CGCGGGAAGC ATGTCATCTT GGGAGTGGGG CTTACTGCGC TTGCGCAAAT TGCCATGGTG
GTCGGCACTG TTCAATTGCC GTTGTATATG CAGGAACTCC ATGGAGTTAG TGCGCTTAAT
GCGGGACTTA TTTTGCTACC AGGATCATTG CTGATGGCAT TTGCCAGTCC GGTCGTTGGT
GGATTTTACG ACCGTCATGG CATGCGCGTA AGTGCAACAA TTGGGCTTTC CTGTCTTGCG
GCTGGATCTC TTGGTTTTAC TATCTTTGAC GGTGAAACTC CTCTGGTAGT GGTGGCACTC
GTATATGGTG TTCGTATGAT TGGCTTAGCC TTCTTAATGA TGCCGATGAC CGCCTATGCT
CTTGAGAAGC TTAAAGGTGG TGATGTGGCA CATGGTACCG CTATTGTTAA TTCTTTTCGC
CAGATCGGCG GGGCGCTTGG ATCAAGCGTG CTCGTTGCCA TGATGTCGGC AGCCACTATG
CAGCTTGATC CAGGGGCACC TACTGCTTCA GAAGGGCTTT CAGTTGTGGG GCTTAATGCC
AGCTTTGGTA TCCAGGTTGC CTTAGCAATC TTTACCCTGG CTATCGTGCT TATGGTGGTA
AAGCCTTTGA AGCGCCGAGA TAATAAGTAA
 
Protein sequence
MPDMMVERAS TTEQSDASEI SEVSSVSPKT ADSALASARR HVLPLPISPK GSLFVMLAAS 
FVTCSAQSML SAALPYIMSD FNVDTTLAQL LTTGYFYVLG ILSVLTAFLI NSFDTRKLFL
AAMCFFVMGS GIAIFAPNYP VLLAARFLQA GGNGIMIPLI QNVAVEVYPK ERHGFALGLV
GMVIGFAPVL GPVLSGAIVQ FWGWRAVFDI LGGLGAMALI VSVFTVHNFG EHHHEVLDIR
SCLLFIPGLI IFMVGVTCTE QQGLYQWFSY SLDLLGAFLI VAFCYRQAHM EQPLLRLSLF
RGKHVILGVG LTALAQIAMV VGTVQLPLYM QELHGVSALN AGLILLPGSL LMAFASPVVG
GFYDRHGMRV SATIGLSCLA AGSLGFTIFD GETPLVVVAL VYGVRMIGLA FLMMPMTAYA
LEKLKGGDVA HGTAIVNSFR QIGGALGSSV LVAMMSAATM QLDPGAPTAS EGLSVVGLNA
SFGIQVALAI FTLAIVLMVV KPLKRRDNK