| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_08480 |
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| Symbol | |
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| ID | 8375056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cryptobacterium curtum DSM 15641 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013170 |
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| Strand | - |
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| Start bp | 971155 |
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| End bp | 974622 |
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| Gene Length | 3468 bp |
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| Protein Length | 1155 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644993770 |
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| Product | transcription-repair coupling factor Mfd |
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| Protein accession | YP_003151232 |
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| Protein GI | 256827273 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.13697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 99 |
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| Fosmid unclonability p-value | 0.343175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGATAG ATGCCCTCAC ATATCCTCTT AATGCCTGCA AAGACGTGCA TACCTTCTGG
GGTAAGCTCG ATAGCGGTGC AGATGCGACA ATGGGGCTTG CTGCTTCGGC GCGTCCATTT
TTTACTGCAG CTCGCTTTGC GCGTACACCG CAGCCAACAT TGGTCATTGT CGCTGGTGAA
GAAAGCGCCG CAGATTTTGC CCGCACGCTT TCTGCCTATG TAGGTGACAA TCGGGTCCTG
CGTTTTTTTG AGCGAAAGGA CTATCCCACG GCATCAACAC CCGTTGATGT TCATGCGGTA
GCGTGCCGCT TGCAAGCACT TCATGCGCTT GTTGAAAGCC GAGAATGCAT TGTCGTTGCG
AGTTCTCGTG CGCTGATGCG CCTGATGGGT CCAGTGCGGA GCCGTTTTTA TCTTCCGTTG
ACTTTTACGG CAGGTATGGA TGTGCAAAGT GGATCGGGTG AGCGAACGAT CGCGTCGTTT
GAAGCCGCTA CAGAAGAGCT CGTGGCCTGT GGTTATCTCA ACACTGGTGA GCTTTCGGGG
CCAGGAACCT TTTGTGTGGG CGGAGGCACG ATAGATGTCT GGCCCGGTAA TCTTTCCTAT
CCCGTGCGCA TCGACTTTTT CGGTGATGAA GTCGACGAAA TACGACGCAT TGTGCCAGCT
ACGGGACAGA CGATTGCTCG CATCGACAAA GTGGATATAT ATCCCTTACG CGAGTACATG
CCTGATCGTG CCGCCCTTGA TCGAGCACGC CGGATTCTTT TTGATCCTGA TACCACCGAT
CCAGTTTTGC GTGAGTCGCT TGAAGCGCTT GAGGGGGGTG TATACAACGA AGCGGCTGAT
GCCCTGCTTC CGTATTTGTA TGCGCACCTG GCAACATTGG GGGATTTTCT TCCTTCCGAT
GCATTGAGTG TGTTAGTGGA ACCGCGGTCG TTAATTGATG ACGCTCTCCA TGCTGCTGAA
GCACTGTCTT CTCTTCCTGT TGAACACACC AGGTTTGTTG AGGATCTTAT TTGTCCACCA
GCGAAACTTG ATTTTGGAAA AAACCAGCGT TGCACCTACC AGTCGATTAT GCGCGTAGCT
TCTTCGGTTG ATGCTGAAAT ACCCGTAAAG CGTACGGAAG TAGCGGGAGA TCCCGAAAAA
CTTTTTGGAC GGTTGATCAG TTTAACTCAA GCGGATTTTA CCGTTGTGTT TAGTGCTCCT
TCATATCGTG CCCGTGAGGA CATGAAGCTT GCTTTTGTGG AGCGGGGTTT GTCGATTGTC
GACCTTGCGA ATGCTGATGC AGATACCGTT CCTGCGCGTC TGCGTCGGGG GGTCGTCAAC
GTGGTGGAAG CAGATATTCC GCTCGGTTTG ATTATTCCAA AGGCAAAAAT TGCGCTGATA
AGCCTGTCTG ACACGCAAGG GGCTACGGCT ATTCGTCATC ATCGACGGGT GGATATCACC
GAGATTACGT TCCCCTTTAA TCCAGGTGAT TATGTGGTTC ATGCCGCTCA TGGTATCGCG
TTTTTCCGCG ATGTTGTACG TCAAGAAGTG GGCGGGTCGC TGCGTGATTA TCTACTGTTG
GAATATGCCG AAGGCGACAA GCTTTATGTG CCGGTTGAGC AGCTTGATCG GGTAACGCGT
TACGTTGGTC CTGAAGGATC TTCTCCGCGC TTGACACGCT TGAATACAAG CGACTGGTCG
CGTGCCATGG GGTGCGCGCG TAAGGCAAGC AAGAAGCTTG CGTTCGACCT GGTAGATGTG
TATACGCGCC GGTCGGCTGT TTCAGGGTTT CAGTATTCTG CCGACACACC CTGGATGCGG
CAGATGGAAG AAGATTTTCC GTATCAGGAA ACCCCCGATC AGCTGGCGGC AATCGCCGAT
GTGAAAGCAG ATATGCGCTC GGCTCGACCG ATGGATCGAC TTATTTGCGG TGATGTCGGA
TTTGGGAAAA CCGAAGTGGC GCTTCGAGCC GCTTTTAAGG CGACACAGGA TGGCAAGCAG
GTTATGGTGC TGTGTCCGAC AACTATCTTG GCGCAGCAGC ATTACACAAC ATTTAAAGAC
CGCTTTGAAG AGTATGGCGT TACGGTGGAA GTGCTCAGTC GATTTCGCTT TTCGTCTGAA
CAAGCTGCGG CGCTTTCTGG TTTTGCGCAG GGCACTGTTG ATGTGCTGGT GGGTACCCAT
CGCCTGCTCT CGCGTGATGT AAACCCGCAC GATCTGGGGC TTGTTATCAT CGACGAAGAG
CAACGCTTCG GGGTAGGGCA TAAAGAACAA TTGAAGAACC TGCGCGAGTC GATCGATGTA
CTGACCTTGT CTGCCACACC GATACCACGA ACGATGCAGA TGTCCCTATC GGGCGTGCGT
GATATGAGCT TGATTATGAC ACCCCCCGAC GATCGCAAGC CGATTAAGGT GCATGTGGGT
GAATGGGATC CTGATGTGGT GTCCGATGCG ATTCGGCGAG AATTAGCGCG CAACGGCCAG
GTGTACTACG TGTCAAACCG GGTGCGTACT ATTGATGATG CGGTAGCGCG CGTTGGTCAG
GCAGCGGGCG AAGCGCGCAT TGGTGTTGCG CATGGTCAGA TGAGTAAAGA ACAGCTCGAA
CAGGTTATGG AAGAATTTGC GGCGGGCGAA ATCGATGTGC TTGTTGCGAC AACCATTATT
GAAAGTGGCA TCGATAATCC CCACACGAAT ACGCTTATTA TTGAGGATTC ACAGCGCCTT
GGATTGGCAC AGATGTACCA GTTAAAAGGA CGTGTTGGTC GCAGTTCATT GCAAGCGTAC
GCCTACTTTA TGTTCCCCGA AAATGTTCCG TTAACTGAAG AAGCGACGGC GCGCCTTGAA
GCTGTGGGTG AATACCAAGA ACTAGGCAGC GGGATGAAAG TCGCCATGCG CGACCTTGAA
ATTCGCGGTG CTGGCAGCAT GTTGGGAGCT GAGCAGAGTG GCAACATGAG CGCCGTGGGT
TTCGATTTGT TTGCGCAGAT GCTCACCGAA GCTGTGCGGG CGACACGTGA GGGGCGTGCC
GATACGCTTC ATGACCTTCC GCCAGCTCTT TCGGATATCA CCGTTAACGT ACCTGATCAT
ACCTATATTC CTGAAGAATA CGTGCCCGAT GCCGATGCGC GTGTGCTCGC TTATCGACGG
GTCGCTTCAG CTGATACACC AGAGGTAGTC GATGGGATTG CCGACGAGCT TTGCGCGCGT
TATGGAGCAG CACCACGTGC GGCGCAGAAT TTCTTTGCGA AAGCACGCAT TAAGGCACGC
GCGCATCAGA TGGGGGTAAC AGCGGTCAGT ATCGTGGCAG GTAAACTCAA TATTGAGCCG
ATTGCACAGC CGCCCGCATC GCTGGGGACA GACATTCGCC GTGCTCGTGG GCGGTATATT
GTGCAGTCAA AAAAACTGCA GATACCTCTG ACCTACTTTT CATATGACGA CGAACATCCG
CTTATTGAAG CGATCGATGC CTTTATAGCT ACGTTACGTG CCAATTAA
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| Protein sequence | MLIDALTYPL NACKDVHTFW GKLDSGADAT MGLAASARPF FTAARFARTP QPTLVIVAGE
ESAADFARTL SAYVGDNRVL RFFERKDYPT ASTPVDVHAV ACRLQALHAL VESRECIVVA
SSRALMRLMG PVRSRFYLPL TFTAGMDVQS GSGERTIASF EAATEELVAC GYLNTGELSG
PGTFCVGGGT IDVWPGNLSY PVRIDFFGDE VDEIRRIVPA TGQTIARIDK VDIYPLREYM
PDRAALDRAR RILFDPDTTD PVLRESLEAL EGGVYNEAAD ALLPYLYAHL ATLGDFLPSD
ALSVLVEPRS LIDDALHAAE ALSSLPVEHT RFVEDLICPP AKLDFGKNQR CTYQSIMRVA
SSVDAEIPVK RTEVAGDPEK LFGRLISLTQ ADFTVVFSAP SYRAREDMKL AFVERGLSIV
DLANADADTV PARLRRGVVN VVEADIPLGL IIPKAKIALI SLSDTQGATA IRHHRRVDIT
EITFPFNPGD YVVHAAHGIA FFRDVVRQEV GGSLRDYLLL EYAEGDKLYV PVEQLDRVTR
YVGPEGSSPR LTRLNTSDWS RAMGCARKAS KKLAFDLVDV YTRRSAVSGF QYSADTPWMR
QMEEDFPYQE TPDQLAAIAD VKADMRSARP MDRLICGDVG FGKTEVALRA AFKATQDGKQ
VMVLCPTTIL AQQHYTTFKD RFEEYGVTVE VLSRFRFSSE QAAALSGFAQ GTVDVLVGTH
RLLSRDVNPH DLGLVIIDEE QRFGVGHKEQ LKNLRESIDV LTLSATPIPR TMQMSLSGVR
DMSLIMTPPD DRKPIKVHVG EWDPDVVSDA IRRELARNGQ VYYVSNRVRT IDDAVARVGQ
AAGEARIGVA HGQMSKEQLE QVMEEFAAGE IDVLVATTII ESGIDNPHTN TLIIEDSQRL
GLAQMYQLKG RVGRSSLQAY AYFMFPENVP LTEEATARLE AVGEYQELGS GMKVAMRDLE
IRGAGSMLGA EQSGNMSAVG FDLFAQMLTE AVRATREGRA DTLHDLPPAL SDITVNVPDH
TYIPEEYVPD ADARVLAYRR VASADTPEVV DGIADELCAR YGAAPRAAQN FFAKARIKAR
AHQMGVTAVS IVAGKLNIEP IAQPPASLGT DIRRARGRYI VQSKKLQIPL TYFSYDDEHP
LIEAIDAFIA TLRAN
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