| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_07960 |
|---|
| Symbol | |
|---|
| ID | 8375004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | - |
|---|
| Start bp | 910139 |
|---|
| End bp | 911641 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644993719 |
|---|
| Product | tRNA/rRNA cytosine-C5-methylase |
|---|
| Protein accession | YP_003151182 |
|---|
| Protein GI | 256827223 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 102 |
|---|
| Fosmid unclonability p-value | 0.29477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGC TTTCCTGCGC GCGGCGCCTT GCCGTAGAGA TCGGCCGCGA TGCGCGTGAG
CGCAAAGCAT TTGCTTCGGA TCTTCTTGAT GCGCGATTGG GTAAAAGCGG CTTGAATGCT
GCTGATCGTG CGTTTACCCG TGTGCTAGTT CTTGGCGTGG TAGCAACGGT TGGCACTCTT
GATGAGGTGA TTGGACGCTG TCTTGATCGG GCAGGGGATG TTGGTCTGCA GCTGCGTGAT
GCTCTGCGTG TGAGTACCTA TGAAATTATC TTTCTGAATA AAGATGCCTA TGTGGCCGTT
GATCAGGGAG TTGAACTGGC TGCATTTGTG CAGCCACGCG CCCGCCGTCT TGCTAATGCG
GTGTTGCGTC GCATTATGGC AGCTCGCAAG TCGTTTCCCT TTGGCGATCC ACAAACTGAC
GATGCTGCAC TTGCGCGCTT GTACGGGTTT CCACTCTGGA TGGCACAGAT GTTTATCGCC
GAGATGGGTC GCACGTCAGC GGAACAATTT ATGGCAGCCA GTAATGAACC GGCATCGGTT
TACTTTGGTG TAAACGCGCT CTGTACGTCG GATGCGGCAA TTGAAAATGC GTTTACCCGC
GAAAAGATTA CGCTTAAACC GGTGACATTG CCCGTTGTAT CTGCTGGTGA ATCATCTGCA
CAGAGGATGC CCTCTACCCA CAGAGCACCT ACTACACAGA CGGCGTCCTC TCTACACGGG
GCATTCGCTA CCCACAAGGA GTTTTCAGGC GATACAGAAT CATCTGCGCG AACGGTAACG
ATTTCCGGCT GTTTTGAGGC GCCACATGCC TCGACGGTGA CATCGCACGT AGCGCGTCGT
GCATTCGATC AGGGGCAGCT GCTCGTTAGT GATGCGGCGG CACAAGCAGT TGCTTTACTG
GCGCTACCCG ATGTTGCTCC CACATCGTTT CTTGAGGTCG GTTCAGGGCG CGGGACGAAA
ACCATCTTGC TGCAATCGAA TGCGTATCGC CGTTTTGGCA CGCAGATGGA TCTTACCTGT
GTGGATGACC ATGAATTCAA GATGAATGTC GCCTCAAGTC GAGCAGAGCG CTATGGTGCG
CATATTTCAC ACCCGCTTGT AGCTGATGGA CGCACGTTGT CACCTGCTCG ATTCAATGCC
GGCTTTGCAG CGGCGCTCGT TGATGCGCCT TGCTCCGGGC TTGGTACCTT GCGCCGTCAT
CCAGAAATAC GTTGGCGGCT AGCACCACGC GATATTGCGG CACTTGCCGA ACTTGAATTG
GACCTCATAA CAGCTGCTGC TCGCTTGGTG GTGCCCTTTG GGCAGTTGAC CTATGCAACC
TGTACGGTCA GTGCCGCAGA AAACGAAGGT GTGATAAAAC GATTTCTCGC TTCGGATACG
GGTAAGCAGT GGCGTATTGT ACCCACGCCC GTGGGGGGTG CTTCGAAGCT CTTTTTTAAG
ACAACATTAA CCGCTGGGGG ATGTGACGCG CATTTCGCTT GCCGCCTGCG GCGGATTAAC
TGA
|
|---|
| Protein sequence | MSELSCARRL AVEIGRDARE RKAFASDLLD ARLGKSGLNA ADRAFTRVLV LGVVATVGTL
DEVIGRCLDR AGDVGLQLRD ALRVSTYEII FLNKDAYVAV DQGVELAAFV QPRARRLANA
VLRRIMAARK SFPFGDPQTD DAALARLYGF PLWMAQMFIA EMGRTSAEQF MAASNEPASV
YFGVNALCTS DAAIENAFTR EKITLKPVTL PVVSAGESSA QRMPSTHRAP TTQTASSLHG
AFATHKEFSG DTESSARTVT ISGCFEAPHA STVTSHVARR AFDQGQLLVS DAAAQAVALL
ALPDVAPTSF LEVGSGRGTK TILLQSNAYR RFGTQMDLTC VDDHEFKMNV ASSRAERYGA
HISHPLVADG RTLSPARFNA GFAAALVDAP CSGLGTLRRH PEIRWRLAPR DIAALAELEL
DLITAAARLV VPFGQLTYAT CTVSAAENEG VIKRFLASDT GKQWRIVPTP VGGASKLFFK
TTLTAGGCDA HFACRLRRIN
|
|---|
| |