Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_06820 |
Symbol | |
ID | 8374890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 794989 |
End bp | 795879 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644993605 |
Product | pseudouridine synthase family protein |
Protein accession | YP_003151074 |
Protein GI | 256827115 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 108 |
Fosmid unclonability p-value | 0.493821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCTG CGACGCCTGA GAAATCTAAG ACACCTGAGA CACCTGAGAT ATCTGGGGTG TCGCCTGCAA TACAAACACA GGAAGCACCA TTTACTTCTG AGGAGGTATA TGCGTGGCAG GAACGCCTTG CGCATCATGA TTTTCCCTTG CGACTACAGA AGTTTCTTGC ACGCGCGGGC GTGGCAAGCA GGCGTGGTTC AGAGCGGCTT ATCAGTGCAG GTCGGGTTGC GGTAAATGGC ATTGTTATTA CCGAGCTCGG CACAAAGGTT GATCCGCTGG TTGATGAAGT CTGTGTCGAT GGAGCTATCG TAACGTGGGG CGCGCCGGCG GTTACGCTTG CGCTCAATAA ACCAGCCGGC ATTATCACCA CTATGAAAGA CCTTCGAGGT CGGCGTTGTG TAGCTGATAT TATGCCAACC GAACAGTATC CGGGGTTATT TCCCATTGGG CGGCTCGATC AGGACACGAC CGGATTACTC CTCTTTTCCA CTGACGGCAA CTTGGGCAAT GCATTGCTTC ATCCGAGCCA TGGGGTGTCC AAAGTGTATC GAGCCACTAT AGAGGGCTCT ATTGGACAAG CGGCACTCGA GCAGCTCGCT AGCGGAATAC TGCTCGACGA CGGCATGACC GCCCCGGCGC GAGTATCGGT TGTGCAAGCT GGCAAAAAAC ATAGTGTTAT TGAGCTTGAA CTGCATGAAG GCCGTAAACA TCAGGTAAAA CGCATGTGTC AAGCAGTGGG TCATCCGGTG GTAAAGCTTC ATCGTGCTTC CTTTGGGCCG ATTGATCTTG CTGGCTTAGC AACTGGTGCG TATCGTCGCC TGGAAGGTGC GGAGTTGAGC GTGCTCTATA ATGCCGCGGG CCTTTGCTGC CCCGACGACG AGGAATGTTA G
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Protein sequence | MLPATPEKSK TPETPEISGV SPAIQTQEAP FTSEEVYAWQ ERLAHHDFPL RLQKFLARAG VASRRGSERL ISAGRVAVNG IVITELGTKV DPLVDEVCVD GAIVTWGAPA VTLALNKPAG IITTMKDLRG RRCVADIMPT EQYPGLFPIG RLDQDTTGLL LFSTDGNLGN ALLHPSHGVS KVYRATIEGS IGQAALEQLA SGILLDDGMT APARVSVVQA GKKHSVIELE LHEGRKHQVK RMCQAVGHPV VKLHRASFGP IDLAGLATGA YRRLEGAELS VLYNAAGLCC PDDEEC
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