Gene Ccur_06820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_06820 
Symbol 
ID8374890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp794989 
End bp795879 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content54% 
IMG OID644993605 
Productpseudouridine synthase family protein 
Protein accessionYP_003151074 
Protein GI256827115 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones108 
Fosmid unclonability p-value0.493821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCTG CGACGCCTGA GAAATCTAAG ACACCTGAGA CACCTGAGAT ATCTGGGGTG 
TCGCCTGCAA TACAAACACA GGAAGCACCA TTTACTTCTG AGGAGGTATA TGCGTGGCAG
GAACGCCTTG CGCATCATGA TTTTCCCTTG CGACTACAGA AGTTTCTTGC ACGCGCGGGC
GTGGCAAGCA GGCGTGGTTC AGAGCGGCTT ATCAGTGCAG GTCGGGTTGC GGTAAATGGC
ATTGTTATTA CCGAGCTCGG CACAAAGGTT GATCCGCTGG TTGATGAAGT CTGTGTCGAT
GGAGCTATCG TAACGTGGGG CGCGCCGGCG GTTACGCTTG CGCTCAATAA ACCAGCCGGC
ATTATCACCA CTATGAAAGA CCTTCGAGGT CGGCGTTGTG TAGCTGATAT TATGCCAACC
GAACAGTATC CGGGGTTATT TCCCATTGGG CGGCTCGATC AGGACACGAC CGGATTACTC
CTCTTTTCCA CTGACGGCAA CTTGGGCAAT GCATTGCTTC ATCCGAGCCA TGGGGTGTCC
AAAGTGTATC GAGCCACTAT AGAGGGCTCT ATTGGACAAG CGGCACTCGA GCAGCTCGCT
AGCGGAATAC TGCTCGACGA CGGCATGACC GCCCCGGCGC GAGTATCGGT TGTGCAAGCT
GGCAAAAAAC ATAGTGTTAT TGAGCTTGAA CTGCATGAAG GCCGTAAACA TCAGGTAAAA
CGCATGTGTC AAGCAGTGGG TCATCCGGTG GTAAAGCTTC ATCGTGCTTC CTTTGGGCCG
ATTGATCTTG CTGGCTTAGC AACTGGTGCG TATCGTCGCC TGGAAGGTGC GGAGTTGAGC
GTGCTCTATA ATGCCGCGGG CCTTTGCTGC CCCGACGACG AGGAATGTTA G
 
Protein sequence
MLPATPEKSK TPETPEISGV SPAIQTQEAP FTSEEVYAWQ ERLAHHDFPL RLQKFLARAG 
VASRRGSERL ISAGRVAVNG IVITELGTKV DPLVDEVCVD GAIVTWGAPA VTLALNKPAG
IITTMKDLRG RRCVADIMPT EQYPGLFPIG RLDQDTTGLL LFSTDGNLGN ALLHPSHGVS
KVYRATIEGS IGQAALEQLA SGILLDDGMT APARVSVVQA GKKHSVIELE LHEGRKHQVK
RMCQAVGHPV VKLHRASFGP IDLAGLATGA YRRLEGAELS VLYNAAGLCC PDDEEC