| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_06540 |
|---|
| Symbol | |
|---|
| ID | 8374862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | + |
|---|
| Start bp | 764543 |
|---|
| End bp | 765766 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644993577 |
|---|
| Product | arginine deiminase |
|---|
| Protein accession | YP_003151050 |
|---|
| Protein GI | 256827091 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2235] Arginine deiminase |
|---|
| TIGRFAM ID | [TIGR01078] arginine deiminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00222308 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 103 |
|---|
| Fosmid unclonability p-value | 0.406316 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAG TCAACGTTAA GAGCGAGATC GGCCCGCTCA AGAAGGTCAT CCTTCACCGG
CCCGGCAAGG AGCTATTAAA CCTCACCCCT GACACACTTG AGCGTCTGTT ATTTGACGAC
ATCCCGTTTC TGCGGGTAGC CCAAGACGAA CATGACGCAT TCGCACAGGT TTTGCGCGAT
GAGGGCGTCG AGGTTGTCTA CCTTGAGGAT CTCATGGCAG ATGTCATTCG TGACAATCCT
GCTCTGCGCG ATGAGTTTAT TGCTCAGTGG ACCCAAGAGG CTGGTATTCA TACCGAAAAG
TGGCAAGGTA TTATTCGTGA TTACCTCAAT AGCGAATATG CCGATCCTAA GGCATTGGTT
GAAAAGACCA TGGAAGGCAT CAATTTAGCC GAACTTGATG TCGATCGCTC TGGCAGCCTT
ATCGACTTGG TGTCAAGCCC CACCAAGATG GTGGTTGACC CCATGCCAAA CCTGTACTTC
ACCCGTGATC CCTTTGCTAT GGTGGGCACG GGGGTAACTG TACATCGTAT GTATTCGGTT
ACCCGCAATC GTGAGACCCT CTATGGTCAG TACATCTTTG ACAATCATCC TGATTTCAAG
GGCACACCGC TTTACTATCG TCGTGATTGG GCCTTCCACA TTGAAGGCGG AGACGTTTTG
AACTTGAACT CTCATGTATT GGCTGTTGGT ATCTCTCAGC GTACCGAACC TGATGCTATT
GACACGCTCG CTCGTGGCAT CTTTGCCGAT GAGACGAGCT CCATTGACAC GATCCTTGCC
TTTGATATTC CCAACTCTCG TGCGTTTATG CACCTCGATA CGGTGTTTAC ACAGATCGAC
CGTGACAAGT TCACGATCCA TCCGGGTATC TTAGGACCCT TAACCGTCTT TGAACTTACT
CCTGCCGCAG GCGGAGAAGT ATCCGTTAAG CGTCTCGATA GTGACCTTGA GAGCATCTTG
GCTAAGTATG TTGGCTGCCC GGTTAAGCTT TTGCAGTGCG GTGCGGGCGA TCGTATTGCT
GCAGAGCGTG AGCAGTGGAA CGACGGCTCA AATACCCTGT GCATCCGTCC GGGTACTATT
GCGGTTTATG AGCGCAACGA GGTAACCAAC GATTTTCTCT ACAAGCAGGG TCTTGATCTG
AAGGTCGTGC CCTCAGCTGA GCTCTCCCGC GGTCGTGGTG GCCCACGCTG CATGAGCATG
CCCGCTTGGC GCGAGGATAT CTAA
|
|---|
| Protein sequence | MTGVNVKSEI GPLKKVILHR PGKELLNLTP DTLERLLFDD IPFLRVAQDE HDAFAQVLRD
EGVEVVYLED LMADVIRDNP ALRDEFIAQW TQEAGIHTEK WQGIIRDYLN SEYADPKALV
EKTMEGINLA ELDVDRSGSL IDLVSSPTKM VVDPMPNLYF TRDPFAMVGT GVTVHRMYSV
TRNRETLYGQ YIFDNHPDFK GTPLYYRRDW AFHIEGGDVL NLNSHVLAVG ISQRTEPDAI
DTLARGIFAD ETSSIDTILA FDIPNSRAFM HLDTVFTQID RDKFTIHPGI LGPLTVFELT
PAAGGEVSVK RLDSDLESIL AKYVGCPVKL LQCGAGDRIA AEREQWNDGS NTLCIRPGTI
AVYERNEVTN DFLYKQGLDL KVVPSAELSR GRGGPRCMSM PAWREDI
|
|---|
| |