Gene Ccur_05460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_05460 
Symbol 
ID8374754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp645230 
End bp648067 
Gene Length2838 bp 
Protein Length945 aa 
Translation table11 
GC content51% 
IMG OID644993470 
Productprotein translocase subunit secA 
Protein accessionYP_003150947 
Protein GI256826988 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID[TIGR00963] preprotein translocase, SecA subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones111 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTTC TTTCGAAGAT TCTTACTGTT GGTGAGGGTC GTCAGCTTAA AAAGTATCAC 
GGCATTGTTG AGGTTATTAA TGGCCTTGAA CCCGCTATGG AAAAGCGCAG CGACGATGAG
CTCCGTGCGT TAACGGGGCA GCTACGTGGA CGCGTTCAGG CAGGTGAAGA CCTGGATGCT
ATCCTGCCTG AGGCGTTTGC TTGTGTGCGC GAAGCGTCAA AGCGTACGCT GGGGCTGCGT
CATTTTGATG TGCAGCTTAT CGGTGGTATG GCGCTTAATG CCGGACAGAT TGCCGAAATG
AAAACCGGTG AAGGTAAGAC GCTTGTCTCG ACACTTGCCG GTTATCTCAA TGCGCTCGGC
GGTAACAACG TTCATATCGT GACGGTCAAC GACTACCTAG CACGACGCGA CAGTGAATGG
ATGGGGCGTG TGTACCGTTT CCTCGGTATG AAGGTAGGCC TTATTCAAAA TGGTATGCAG
CCGTCGCAGA AGATTCCTGC CTATCAGGCT GATATCACAT ATGGTACGAA CAGCGAGTTT
GGTTTTGATT ATCTGCGTGA CAACATGGTT ACGCGTGCCG ATCGTCGCGT ACAGCGCGGT
CATCACTTTG CTGTGGTCGA CGAGGTTGAC TCAATCCTCA TTGATGAAGC GCGTACCCCG
TTGATTATAT CGGGGGCAGG CACCCAAGCT GCTGATACCT ACCGTCGTTT TGCCCGCGTA
ATGCCAGGTC TCAAGCGCGA CATCGACTTC GAAATGGACG AAGCAAAGCG CACGATTACC
GCAACTGAAA CAGGTCTTGT CAAGATTGAA AACCGCTTGG GTATTGAAGA TCTCTACAAC
GATCCCTCAG GGCAGATGCC TAACCATCTT CAGCAGGCAT TAAAAGCTCA ATTCCTTTTC
CATCGCGATA AAGATTACGT GGTGGCAGAT GGTGAAGTAA AAATCGTTGA TGAATTTACG
GGTCGTATTA TGGAAGGCCG TCGCTGGTCA GAGGGTCTTC ATCAGGCCAT CGAGGCTAAA
GAAGGCGTCG CCATTAAAGA AGAGAATCAG ACGCTTGCGA CCATTACCCT GCAAAATTAC
TTCCGTCTGT ATGAAAAGCT GTCAGGCATG ACCGGTACAG CCATGACTGA AGATGCTGAA
TTCCGTGAGA TCTACAAGCT CCCGGTTATG GCTATTCCAC CGAATCGCCC GGTTGCGCGT
AAAGACGAAA ACGATCTTAT TTACCGTACA ATTGATGCAA AGTTTAATGC GGTTGCCGAC
GACATTGAAC GCCGCAATGA AGCGGGTCAA CCCTGCCTCA TCGGTACGGT TTCCATTGAG
AATTCCGAGA AGCTTTCACG TTTACTTGAT AAGCGCGGTA TTGCCCACGA AACGCTCAAC
GCTAAAAACC ACGAGCGCGA AGCGCATATC ATCGCACAGG CTGGGCGTGT CGGTGCGGTA
ACTATCGCAA CAAACATGGC CGGTCGTGGT ACCGACATCC TACTGGGTGG TAATGCCGAA
GTGATGGCAG ACGATCTACT GCGTGCACGC GGCTTTGACC CCGATATCGA TCCTGATTTC
AAACCCGATG TTGAAGCAGA AGAAGAAACG GAACCCGTAG CTCCTTCTGA AGCGGATCGC
GCCCAAGCGT TAGCTGAGGC CCGTGCTATT ACCACCGATG AACATGAGCG CGTTTTAGCT
GCTGGTGGAC TGTGCGTTAT TGGCACCGAG CGTCATGAAA GCCGTCGTAT CGACAATCAG
TTGCGTGGTC GTGCCGGCCG TCAGGGCGAT CCGGGATCAA CACAATTCTA TTTGTCGTTG
GAAGATGATC TCATGCGCCT GTTCGGGGGC GATCGCATGG ATCGGGTGGC GTCCATGATG
GAGCGCACTG ATATGCCTGA AGATATGCCT ATTCAGGCAG GTATGGTTTC GAAAGCCATC
GAAAGTGCGC AGCGCCAGGT TGAAACAATC AACTTTGGTG CCCGTAAAAA TGTTCTTGAA
TACGACGATG TTATGAATCT GCAGCGCAAA GCCATCTATG AAGAGCGCAA TGCCATTCTT
GATGGTAAAG ACTTAACTGA GCGTATCCCT GAAATCGCTG AAGAGGCTGC TCGTACGGTC
GTGGAAGAAA ACTGTCCCGA CCGTTCGCCA TCGGACGACT GGGATATGCG CGCGGTCGAT
CTGTGGGTTT CTCAGATGGA CGGGCGTAAT TCGTTCTCAG CTGAAAATAT CGATCACGAA
GATGATCCTG AAGCGCTTAT TGAAGCAGTT ACCGAAGAAC TGGTGAGTGC ATTCGACGAA
AAGCGTGAGA TTTTGGGCGA CGAGATCATG AAGAGTCTTG AGTCACAGAT CATGCTGCGC
ATCATTGATA CGCGCTGGAT GGATCATCTT TCCAATATGG ATTATCTCAA AACAGGTATT
GGGCTGCGTG CATTTGGTCA GCGCGATCCA CTGGTAGAAT ACAAAAACGA AGCGCACCGT
GCGTTTGGTG AGATGACCTC AGGCATGTAT GAAACGTTTT TGCGCACCGT TTTGCGTTTG
CAGATTGCTA CACGAGAAGA AGTGCCCCAG AACCAGGAAG CGGATCCCAC CGAGCGCTCG
ATGAGCTATT CGTCTCCCGA AGGAACACTC AATGACAGCT CTCTGTCAAC TGCGCAACGC
GTGGCGGCGG CAAGTCGTGC TGCCCATGGT GCTCCTGCGG CTGTGCCGAA TGTACCACGT
GAAGTGGTAA AACCGCAAAC ATACGTGAAG GATAAGACCG ACCCCTACGC CAATGTGGGG
CGTAACGACC CCTGTCCCTG CGGAAGTGGT AAGAAATTTA AGAAATGCCA TGGCGCTAAC
CTCACTGCCC GCAATTGA
 
Protein sequence
MGFLSKILTV GEGRQLKKYH GIVEVINGLE PAMEKRSDDE LRALTGQLRG RVQAGEDLDA 
ILPEAFACVR EASKRTLGLR HFDVQLIGGM ALNAGQIAEM KTGEGKTLVS TLAGYLNALG
GNNVHIVTVN DYLARRDSEW MGRVYRFLGM KVGLIQNGMQ PSQKIPAYQA DITYGTNSEF
GFDYLRDNMV TRADRRVQRG HHFAVVDEVD SILIDEARTP LIISGAGTQA ADTYRRFARV
MPGLKRDIDF EMDEAKRTIT ATETGLVKIE NRLGIEDLYN DPSGQMPNHL QQALKAQFLF
HRDKDYVVAD GEVKIVDEFT GRIMEGRRWS EGLHQAIEAK EGVAIKEENQ TLATITLQNY
FRLYEKLSGM TGTAMTEDAE FREIYKLPVM AIPPNRPVAR KDENDLIYRT IDAKFNAVAD
DIERRNEAGQ PCLIGTVSIE NSEKLSRLLD KRGIAHETLN AKNHEREAHI IAQAGRVGAV
TIATNMAGRG TDILLGGNAE VMADDLLRAR GFDPDIDPDF KPDVEAEEET EPVAPSEADR
AQALAEARAI TTDEHERVLA AGGLCVIGTE RHESRRIDNQ LRGRAGRQGD PGSTQFYLSL
EDDLMRLFGG DRMDRVASMM ERTDMPEDMP IQAGMVSKAI ESAQRQVETI NFGARKNVLE
YDDVMNLQRK AIYEERNAIL DGKDLTERIP EIAEEAARTV VEENCPDRSP SDDWDMRAVD
LWVSQMDGRN SFSAENIDHE DDPEALIEAV TEELVSAFDE KREILGDEIM KSLESQIMLR
IIDTRWMDHL SNMDYLKTGI GLRAFGQRDP LVEYKNEAHR AFGEMTSGMY ETFLRTVLRL
QIATREEVPQ NQEADPTERS MSYSSPEGTL NDSSLSTAQR VAAASRAAHG APAAVPNVPR
EVVKPQTYVK DKTDPYANVG RNDPCPCGSG KKFKKCHGAN LTARN