| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_05320 |
|---|
| Symbol | |
|---|
| ID | 8374740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | + |
|---|
| Start bp | 629135 |
|---|
| End bp | 631261 |
|---|
| Gene Length | 2127 bp |
|---|
| Protein Length | 708 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644993456 |
|---|
| Product | Excinuclease ABC subunit B |
|---|
| Protein accession | YP_003150935 |
|---|
| Protein GI | 256826976 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
|---|
| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 133 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCATC TTTCAAATAT TGATGGGTCA ACAATGGAAG GAAAGCTTCC CGACGTACGT
TTAGCGGGAC AGCCGTTTCG AGTGGTGGCA CCTTTTGAGC CCTCGGGCGA TCAGCCGGCT
GCCATCCGTG CACTTGCGCA GGGTGTTCAG GATGGATTGC GCTATCAAAC ACTCCTTGGT
GTGACGGGCA GTGGCAAGAC GTTCACGATG GCTAAGACCA TTGAAAGCCT CCAGCGTCCA
ACGCTCGTGC TTGAACCAAA TAAAACCCTC GCAGCTCAGG TTGCTGCTGA GTTGCGCGAG
TTTTTCCCCG ATAACGCAGT TGTTTATTTT GTTTCGTACT ACGACTATTA CCAGCCCGAA
GCATACGTTC CATCCACTGA TACCTTTATT GAAAAAGACG CTTCCATTAA TGAAGAGGTG
GAAAAGCTGC GTCATGCTGC GACAAGTGCC TTACTGTCAC GCCGCGATGT GATTGTTGTT
GCATCAGTCA GCTGCATCTA TGGCATTGGC AGTCCGATGG ATTATGCGGG CATGGCGGTG
TTTGCCGACA AAGATAAGCC GATTGACCGT GATCAAATGA TCCATGGACT TATTGACATT
CAGTACGACC GCAACGATTA CGAATTGACG CGCGGTACGT TTCGGGTGCG GGGTGATGCA
CTCGATGTAT TTCCTCCGTA TGCAGACAAC CCGATTCGTC TTGAATTTTG GGGTGATGAG
ATTGAGTCAA TTACGGAAAT CGATAACGTA ACTGGTGAAG TGCTCAATAG CTACGAAGCG
CTTCCTATCT GGCCAGCCTC GCATTATGTT ACCGCTAAAC CCAAGATGGA TCATGCTATT
AAGACGATCC GCGAAGAATT GCGTGAGCGT CTGGCGCAGT TCAAAGAAGA GGGCAAACTG
CTGGAAGCAC AACGCCTTGA GATGCGTGTT TCGTACGATC TCGAGATGAT GGAAACAATG
GGTTTCTGCA GCGGCATCGA AAATTATTCG CGTCATCTAG ATGGTCGTTC TCCTGGTGAG
CCGCCGTATA CGTTACTTGA TTACTTTCCG CGCGATTTCA TTTGCATCGT CGACGAAAGT
CACGTAACAG TGCCGCAGGT TCGCGGCATG CACGAAGGTG ACCGCAGCCG TAAGGTTACC
TTGGCTGAGC ACGGTTTTCG TCTGCCGAGC TGTTTGGATA ACCGTCCCTT GCGTTTTGAC
GAATTTGAGC AACGCGTCGG TCAGTTTATC TATGTGTCGG CTACTCCTGG TGACTATGAG
AATCGCGTAA GCCAGAAAAC AGTTGAACAG ATTATTCGTC CAACCGGCCT GCTTGATCCT
GAGATTATCG TGCGACCAAC TGCAAGTCAG ATCGATGATA TTATCGACGA GGCCCGTGCA
CGTGCGCAAA ATCATGAACG CACGCTGATT ACTACGTTAA CGAAGAAAAT GGCAGAAGAT
CTAACTGATC ATCTACTTGA TCAGAGTATC AAGGCGCGCT ATATGCATTC CGATATTGGT
ACGCTTGAAC GTGTGGATAT CTTACGCGAG CTGCGCCAAG GAAAATTCGA TGTTCTTGTT
GGTATCAATC TACTGCGTGA AGGGCTTGAC TTACCCGAGG TGTCGCTGGT GGCCATTCTT
GATGCCGACA AAGAAGGTTT CTTGCGCCAT TATCGATCGC TCATTCAGAC CATTGGTCGT
GCGGCGCGAA ATGCCCATGG TCAGGTAATT ATGTATGCCG ATAAGCGCAC TGATTCCATG
GACTTGGCTA TCACGGAAAC GCAACGCCGA CGTGCCCTTC AGATGGCCTA TAACGAAAAA
CATGGGATTA CTCCCCAGAC AATCAAAAAA GACATCAATG ACATCATGGA TTATGTCCAG
CAGGAAGCAG GGGATGTTTC AGCTGAGCAG ATCAACCAAG AGCTTGCAAG CCTATCGCGG
GGCGAAGTTA TGCGCGTGGT GGCCGCAATG GAAGAAGACA TGCGCCAGGC TTCGGCTGAC
CTTGACTTCG ATCGGGCTGC TTCACTGCGC GATCAGATTG TTCGTTTGAA ATCTCAAGTT
GAGGGACAAA GCGAAGAAGA TGTCTTGGCT GGCTTGAAGA AGACAGCGCG AAAGGGGAGT
GATTTCGGTC GCCGCAAACG TGCTTAG
|
|---|
| Protein sequence | MPHLSNIDGS TMEGKLPDVR LAGQPFRVVA PFEPSGDQPA AIRALAQGVQ DGLRYQTLLG
VTGSGKTFTM AKTIESLQRP TLVLEPNKTL AAQVAAELRE FFPDNAVVYF VSYYDYYQPE
AYVPSTDTFI EKDASINEEV EKLRHAATSA LLSRRDVIVV ASVSCIYGIG SPMDYAGMAV
FADKDKPIDR DQMIHGLIDI QYDRNDYELT RGTFRVRGDA LDVFPPYADN PIRLEFWGDE
IESITEIDNV TGEVLNSYEA LPIWPASHYV TAKPKMDHAI KTIREELRER LAQFKEEGKL
LEAQRLEMRV SYDLEMMETM GFCSGIENYS RHLDGRSPGE PPYTLLDYFP RDFICIVDES
HVTVPQVRGM HEGDRSRKVT LAEHGFRLPS CLDNRPLRFD EFEQRVGQFI YVSATPGDYE
NRVSQKTVEQ IIRPTGLLDP EIIVRPTASQ IDDIIDEARA RAQNHERTLI TTLTKKMAED
LTDHLLDQSI KARYMHSDIG TLERVDILRE LRQGKFDVLV GINLLREGLD LPEVSLVAIL
DADKEGFLRH YRSLIQTIGR AARNAHGQVI MYADKRTDSM DLAITETQRR RALQMAYNEK
HGITPQTIKK DINDIMDYVQ QEAGDVSAEQ INQELASLSR GEVMRVVAAM EEDMRQASAD
LDFDRAASLR DQIVRLKSQV EGQSEEDVLA GLKKTARKGS DFGRRKRA
|
|---|
| |