Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_04450 |
Symbol | |
ID | 8374653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 523175 |
End bp | 524935 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644993369 |
Product | threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase |
Protein accession | YP_003150850 |
Protein GI | 256826891 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0386598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 116 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGGTTC TCTATAACGA CGGACACATC GATGAATGTC CCGAAGACGA AGAGCTCCAC GTTCTGCGTC ATTCGGCTGC ACATATTTTG GCGCAGGCCG TTAAGCGTTT ATATCCTGAG GCTCGATTTG GCTACGGACC AGCGAACGAC AATGGGTTTT ACTACGACAT CGATCTTGGC GATGCGAAAA TTTCAGAGGA CGATCTGCCC ACTATCGAAG CTGAGATAAA AAAGATCGTT AAAGAGAATC TCAAGTTTAC CGTCTTCGAG TTGCCGCGCG AAGAAGCGGT AAAGTTCATG ACTGAACGGG GCGAAAGCTA CAAGGCAGAG CATATTGGTG ATTTGCCTGA AGATACGCGC TTGACGTTTT ACCAGCAGGG CGAATACGTT GACATGTGCG TTGGACCACA CATCACCTAT ACTAAGGCGC TCAAAGCATT CAAGTTAACA AATGTTTCGG GTGCCTATTG GAAGGGCGAT GCCGCTAATA AAATGCTGAC GCGTATCGGC GGCGTGGCAT TTCGCACCAA AGAAGAATTA GTGCATCATG AAGAGCTGCT TGCCGAAGCG GAAAAACGTG ATCACCGCAA GATCGGCCGC GAAATGGAAC TCTTTATGAT GGCCGATGAA GGCCCGGGCT TTCCGTTCTG GCTGCCTAAT GGTATGCGTC TGAAAAATGC ACTTACCCAG TATTGGATGG AAATGCAAGA GGCATACGGC TATGAACAGG TCGATACTCC TATTATCTTG TCGCGCAAGC TGTGGGAAAC CTCAGGTCAC TGGGACCATT ACAAAGAAAA TATGTACACG ACCGTCATCG ATGATGAAGA CTACGCTGTT AAGCCGATGA ACTGTCCAGG TGCCTGCCTG ATTTATAAAA GTAAGCCGCG CAGCTACCGC GATCTGCCGC TGAAGTTGGC TGAGGCGGGC AAAGATCATC GTCATGAACT GAAGGGCGCT TTACATGGCT TGTTCCGCGT GCGTGCTTTT ACGCAGGACG ATGCCCATCT GTTTATTCGT CCCGATCAGA TTACCGAACA GGTAACCGAT ACCGCACATC TGATTACGGC GTATTACGAA CAGTTTGGTT TTCCGTATCG AGTTGAGCTT TCTACCCGCC CTGATGATTC CATGGGATCC GATGAAGATT GGGCTCTTGC TGAAGAGGGT TTGCGCCAGG CGCTTGAGGC CATGGGTGTC GATTACACCT TAAACGAAGG CGATGGCGCG TTCTACGGTC CAAAAATCGA CTTCCATCTG CAGGATTGCC TTGGTCGTAC TTGGCAGTGC GGCACCATTC AGCTCGATTT TCAGCTGCCG CAAAACTTTG AGTTGGAATA CACCGATTCG GATGGCTCAA AGAAGCGACC AATCCTGATT CATCGTGCGG GCTTTGGTTC GTTTGAACGC TTTATTGGTA TGCTGACCGA ACAGTACGCA GGCAAATTCC CCACATGGCT TTCTCCTTTG CAGGTAAAGG TGTTGCCGGT TTCGGAAAAA CACCGCGAAT ACTCTCGTCA GATTGCTGAT AAGCTGCGTC AAGCTGGTGT ACGCGTGAAG GTTGACGAGC GCGACGAGAA AATTGGTTAC AAGATCCGCG AAGCACGTAG TGTCGATCGG GTGCCCTACA TGCTTATTCT GGGTGAAGTG GAAGAAGAAG CGGGTAACAT TTCAGTGCGC GACCGGTCAA ACGAAACCGT GCAGCGCAGC CTCGATGACT TTATCACTGA CATCCAAGCC GAGATTTCCG AAAGGCGCTG A
|
Protein sequence | MKVLYNDGHI DECPEDEELH VLRHSAAHIL AQAVKRLYPE ARFGYGPAND NGFYYDIDLG DAKISEDDLP TIEAEIKKIV KENLKFTVFE LPREEAVKFM TERGESYKAE HIGDLPEDTR LTFYQQGEYV DMCVGPHITY TKALKAFKLT NVSGAYWKGD AANKMLTRIG GVAFRTKEEL VHHEELLAEA EKRDHRKIGR EMELFMMADE GPGFPFWLPN GMRLKNALTQ YWMEMQEAYG YEQVDTPIIL SRKLWETSGH WDHYKENMYT TVIDDEDYAV KPMNCPGACL IYKSKPRSYR DLPLKLAEAG KDHRHELKGA LHGLFRVRAF TQDDAHLFIR PDQITEQVTD TAHLITAYYE QFGFPYRVEL STRPDDSMGS DEDWALAEEG LRQALEAMGV DYTLNEGDGA FYGPKIDFHL QDCLGRTWQC GTIQLDFQLP QNFELEYTDS DGSKKRPILI HRAGFGSFER FIGMLTEQYA GKFPTWLSPL QVKVLPVSEK HREYSRQIAD KLRQAGVRVK VDERDEKIGY KIREARSVDR VPYMLILGEV EEEAGNISVR DRSNETVQRS LDDFITDIQA EISERR
|
| |