Gene Ccur_03480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_03480 
Symbol 
ID8374556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp404655 
End bp405905 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content53% 
IMG OID644993272 
Producttranscriptional regulator with HTH domain protein and aminotransferase domain protein 
Protein accessionYP_003150756 
Protein GI256826797 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones99 
Fosmid unclonability p-value0.147628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCTG CTCATCTTAC CTTCGATTCA ACCAGTGACA AAATTGCCAC TCGCGTGCGC 
AAGATGCGTT CAAGCGCGGT GCGCGATCTG TTTGCCGCAG CAACACGCGA CGATATTATT
TCTCTGGCAG GCGGTATGCC CGATGTGCGT TTGCTACCGG AAGAAGCGGT TTGTAAGGCT
GCTGAAGCGG CGTGTGGCGC CGCACGCTCC GAAGCATTGC AGTATGGCGG CACGAATGGC
CGTGAAGCAA CGCGTCGAGT GTTCTGTGGT CTCATGCGCG ACATTGGCGT GCGTTGTCGT
CCCGACGAAG TGCTTATTAC AACAGGCGCG CAGGAAGCCC TTGATCTGAT CGCAAAAACT
TTTATCGATC CGGGCGACAT CATTATTACC GAGGGTCCCA CGTATTTAGG GGCTCTTCAG
GCATTCTCAG CATACGAACC CGATATCCAT TGCATTCCTT TTGACGAAGA AGGCATGCGC
ATGGACTTGC TTGAAGAAGA GCTCGAACGT TTGGGCGTCG GTGCCGTTAA GTTTTTATAC
ACCATTCCAA ACTTTCAGAA CCCAGGCGGA GTTACCATGT CGTCTGCCCG CCGCACCCGC
TTAATTGAGC TAGCGGATCG CTACGACGTT ATGGTGGTTG AAGACGATCC ATATGGGCGC
TTGCGGTATA ACGGTGGTCA TATGATTCCG CTGAAGGTGC TTTCGTCCGA TGTTATATAT
CTGGGAACCA TTAGTAAGGT ATTTGCCCCC GGCTTGCGTA CTGGTTGGAT TGCTGCTCCT
AAGGATGTCT TAGCCCGCAT TAATCTGGTG AAGCAAGGGA CCGATCTCTG TGGCAGCAGC
TTCGATCAAG TGGTGGTTGA GCACTACTTT ACCGATACAC CGTGGGAACG CACGCTGCAG
ACCTTTGTGC GTACCTATGC CGAGCGTCGC GATGCCATGC TTGCAGCTCT TGATGAATTC
TTTCCGCCCG AAGCTAGCTG GACCCATCCG GATGGCGGAT TTTTCGTTTG GGTTACTCTG
CCCGAATACG TCGATGTAAC ATCGATGCTT GCCACTGCCC TTGAGGCGGG TGTTATCTAT
ACGCCGGGCA ATGGCTTTTT TCCCGATGGG GTGCGTGGTC GCAACAGTAT GCGTATTGCT
TTCTGCTATG AAAACCCCGA AGCGATTCGA GAAGCCATTC GTCGTCTTGC GGTGGTTATC
GAAGAACGAC TGCAACTATA TCGAGCGTTT CTTGAGGCTG GTGCACTATA G
 
Protein sequence
MSSAHLTFDS TSDKIATRVR KMRSSAVRDL FAAATRDDII SLAGGMPDVR LLPEEAVCKA 
AEAACGAARS EALQYGGTNG REATRRVFCG LMRDIGVRCR PDEVLITTGA QEALDLIAKT
FIDPGDIIIT EGPTYLGALQ AFSAYEPDIH CIPFDEEGMR MDLLEEELER LGVGAVKFLY
TIPNFQNPGG VTMSSARRTR LIELADRYDV MVVEDDPYGR LRYNGGHMIP LKVLSSDVIY
LGTISKVFAP GLRTGWIAAP KDVLARINLV KQGTDLCGSS FDQVVVEHYF TDTPWERTLQ
TFVRTYAERR DAMLAALDEF FPPEASWTHP DGGFFVWVTL PEYVDVTSML ATALEAGVIY
TPGNGFFPDG VRGRNSMRIA FCYENPEAIR EAIRRLAVVI EERLQLYRAF LEAGAL