Gene Ccur_03170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_03170 
Symbol 
ID8374525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp357992 
End bp358915 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content43% 
IMG OID644993241 
Productsite-specific recombinase XerD 
Protein accessionYP_003150726 
Protein GI256826767 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.00000000220198 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAGCAA ATCAGGATCA ACAGCTGTTT TGCGAGTATT ACACACGTTG GGTAAAGGTA 
TACAAAGAGG GTGCCATTCG TGATGTCACC ATGGATAAGT ACCGCTTAAC ACAATCGTGG
CTTGATAAGC TTGTACCGAA CCTTAGACTC TGCGACCTCA CTCGCATAAG TTATCAGCAG
CTTATTAACG ATTATGCCGA GCATCATGAG CGACAAACGA CAATGGACTT TCATCATCAA
TTGAAAGGGT CAATTTTAGA TGCTGTTGAC GAAGGTCTTA TTCCGCGTGA CCCTACGCGG
AAGGTGATAA TTAAGGGAAG GCAACCAAAG CCAAAGAAGA TAAAGTACCT AAACCAATTC
GAGCTTCACG CAATGCTTGC CGATCTTGAT TTAGGGAAAG AAGCTACACT TGACTGGCTT
ATTTTGCTTA TTGCTAAAAC TGGCTTGCGG TTCTCCGAAG CACTTGGATT GATGCCGGCA
GATTTTGACT TCACACACCA AACGGTATCT GTGAATAAGA CTTGGGATTA CAAGCGTAAT
GGCGGGTTCG TTCCAACAAA GAACGTTTCT TCTGTTCGCA AAGTTCAACT CGATTGGCAA
TTAGTGATGC AACTTGCTGG TCTTCTCAAG GAATTACCTG CTGAAAAGCC TATTTTTGTT
GATGGGAAAG TTTACAACTC GACTGCCAAT GGGGTTCTTG CTAGGCATTG TAAACGAGCT
GGAGTTCCTG TAATTACAAT TCATGGACTT CGTCATACAC ATGCTTCACT GTTGCTATTC
GCAGGTGTTT CGATCGCGAG TGTTTCTAGA AGACTTGGTC ATGCAAGCAT GACGACAACT
CAGGAAACTT ATTTACATAT TATTCGCGAG CTTGAGAATC AAGACATTGA TATTGTTATG
CGTTCGCTGG CGGCGCTTTC TTAA
 
Protein sequence
MEANQDQQLF CEYYTRWVKV YKEGAIRDVT MDKYRLTQSW LDKLVPNLRL CDLTRISYQQ 
LINDYAEHHE RQTTMDFHHQ LKGSILDAVD EGLIPRDPTR KVIIKGRQPK PKKIKYLNQF
ELHAMLADLD LGKEATLDWL ILLIAKTGLR FSEALGLMPA DFDFTHQTVS VNKTWDYKRN
GGFVPTKNVS SVRKVQLDWQ LVMQLAGLLK ELPAEKPIFV DGKVYNSTAN GVLARHCKRA
GVPVITIHGL RHTHASLLLF AGVSIASVSR RLGHASMTTT QETYLHIIRE LENQDIDIVM
RSLAALS