Gene Ccur_01230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_01230 
Symbol 
ID8374331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp155672 
End bp156445 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content49% 
IMG OID644993047 
Productchannel protein, hemolysin III family 
Protein accessionYP_003150538 
Protein GI256826579 
COG category[R] General function prediction only 
COG ID[COG1272] Predicted membrane protein, hemolysin III homolog 
TIGRFAM ID[TIGR01065] channel protein, hemolysin III family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones152 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGC GAAGACGCAC ATCCTCATCA TCTGAAGACC CTGGGCCTGC TGGCATATCT 
GCAAGCAGGC CTACCCGTCC TGGTGCGCCT GAGGGGTACA ACGATAATCC CACCAATAAG
CACAAAGCCG TCTCGCGTCC TTGCGTGCGC GAATATCGTT TAGGCGAAGA GATTGCTAAC
TCTGTTTCGC ATGGCGTTGG AGCGCTGCTT TCTATTGCTG CTGTAGTGCT TCTTATTGTG
ACGGCAGTAT CTCATGGTGT GGGTATTCAT TTGGCCGCTG CTCTGATCTA TGGTATCTCC
ATGTTGTTCG AATACCTGGC CTCAACGCTG TATCACGCAC TGACACATGA GGGAGCAAAG
CGCGTTTTCA AGGTACTCGA CCATTCATTC ATTTATCTTT TTATTGCGGG ATCCTATACG
CCGTTTTGTT TGATATCGCT CGCAGATGCC GGCGGCATTT CGCTGGCAGT ATTTGTTTGG
GCTGTTGCAA TTACTGGTAT TGCGCTCGAA GCATTTTGGA CATTTCGTCC TCGTTGGATA
TCGGCTGTTA TATACGTGCT GCTCGGCTGG AGTATTGTGG CATTTTTGCC CACGTTAGCA
CAGGTATTGC CAACAGTTGG TTTCGTGCTT CTTGTAGTGG GTGGCCTGTG CTATACGGTC
GGTGCCGTTT TTTACGTGTT CAAGAAGGTT CCTTACCTCC ATTTTGTGTT TCACCTGTTC
GTGCTTGCGG GCAGTATTTT CCAGTTCTTT GTTATCTTGC TGTATGTGGT GTGA
 
Protein sequence
MKPRRRTSSS SEDPGPAGIS ASRPTRPGAP EGYNDNPTNK HKAVSRPCVR EYRLGEEIAN 
SVSHGVGALL SIAAVVLLIV TAVSHGVGIH LAAALIYGIS MLFEYLASTL YHALTHEGAK
RVFKVLDHSF IYLFIAGSYT PFCLISLADA GGISLAVFVW AVAITGIALE AFWTFRPRWI
SAVIYVLLGW SIVAFLPTLA QVLPTVGFVL LVVGGLCYTV GAVFYVFKKV PYLHFVFHLF
VLAGSIFQFF VILLYVV