Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_01230 |
Symbol | |
ID | 8374331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 155672 |
End bp | 156445 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644993047 |
Product | channel protein, hemolysin III family |
Protein accession | YP_003150538 |
Protein GI | 256826579 |
COG category | [R] General function prediction only |
COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 152 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGC GAAGACGCAC ATCCTCATCA TCTGAAGACC CTGGGCCTGC TGGCATATCT GCAAGCAGGC CTACCCGTCC TGGTGCGCCT GAGGGGTACA ACGATAATCC CACCAATAAG CACAAAGCCG TCTCGCGTCC TTGCGTGCGC GAATATCGTT TAGGCGAAGA GATTGCTAAC TCTGTTTCGC ATGGCGTTGG AGCGCTGCTT TCTATTGCTG CTGTAGTGCT TCTTATTGTG ACGGCAGTAT CTCATGGTGT GGGTATTCAT TTGGCCGCTG CTCTGATCTA TGGTATCTCC ATGTTGTTCG AATACCTGGC CTCAACGCTG TATCACGCAC TGACACATGA GGGAGCAAAG CGCGTTTTCA AGGTACTCGA CCATTCATTC ATTTATCTTT TTATTGCGGG ATCCTATACG CCGTTTTGTT TGATATCGCT CGCAGATGCC GGCGGCATTT CGCTGGCAGT ATTTGTTTGG GCTGTTGCAA TTACTGGTAT TGCGCTCGAA GCATTTTGGA CATTTCGTCC TCGTTGGATA TCGGCTGTTA TATACGTGCT GCTCGGCTGG AGTATTGTGG CATTTTTGCC CACGTTAGCA CAGGTATTGC CAACAGTTGG TTTCGTGCTT CTTGTAGTGG GTGGCCTGTG CTATACGGTC GGTGCCGTTT TTTACGTGTT CAAGAAGGTT CCTTACCTCC ATTTTGTGTT TCACCTGTTC GTGCTTGCGG GCAGTATTTT CCAGTTCTTT GTTATCTTGC TGTATGTGGT GTGA
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Protein sequence | MKPRRRTSSS SEDPGPAGIS ASRPTRPGAP EGYNDNPTNK HKAVSRPCVR EYRLGEEIAN SVSHGVGALL SIAAVVLLIV TAVSHGVGIH LAAALIYGIS MLFEYLASTL YHALTHEGAK RVFKVLDHSF IYLFIAGSYT PFCLISLADA GGISLAVFVW AVAITGIALE AFWTFRPRWI SAVIYVLLGW SIVAFLPTLA QVLPTVGFVL LVVGGLCYTV GAVFYVFKKV PYLHFVFHLF VLAGSIFQFF VILLYVV
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