| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_00770 |
|---|
| Symbol | |
|---|
| ID | 8374285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | - |
|---|
| Start bp | 93173 |
|---|
| End bp | 96961 |
|---|
| Gene Length | 3789 bp |
|---|
| Protein Length | 1262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644993001 |
|---|
| Product | ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing |
|---|
| Protein accession | YP_003150492 |
|---|
| Protein GI | 256826533 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 142 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGA GTCGCCTACG CCCTGGCCAA CTTGCGAGCA TCAAACATCT TGACGGCCCC
CTACTTATCT GTGCGGGTGC CGGATCAGGT AAAACCTTTA CTTTGACACA GCGGATTACT
TGGGCCCTAC TTCCTGGGTC GGGCACCAAT GGTAGTTCAT TTCTTAACAG CATCGACGAA
GCATTGGTGA TCACTTTCAC CAACAAAGCT GCTGGTGAAA TCAAGGACCG CATTCGTGCT
GCGCTGCGTG CTGAAGGAAT GATGACTGAG GCATTAAAAG TGGATGGAGC CTGGATATCT
ACCATACATG GCATGTGTAG TCGTATTCTG CGTGAACATG CTCTGGAAGC TGACCTTGAT
CCGGCGTTTG AGCTGGCGAT GGGTGCCGAT TGCCAGATGG CACGGACGGA AGCCTGTGCG
TGCGTGCTCG AAGAAGTAAA AGAAACCGAT GACAACGCTT ACCAGGCTTT ATTCGCCGGA
TTTCGCACCA CCCAAGCTCT TGAAGATTCC ATCGGGCGCC TACTCGACGA AGTTTCCTAC
CAAACCGACG GGTTTGCATC GCTCGACCGA GGTCCTGACC CTGCCCAAGC AAGCGACGTA
GTACGCAAGG TGCTTGCCGC CTGTGAGGCA ACTATAGCGT GCGGAACAGA TAAAAATCGA
GCGACAGCCC AAGCGCTCGC CGATGCGTTA AACGACCTCA TTGCAAAGAA CCACGTTACC
CCCGAAACGC TGCTAGACGC ACTTAATGCT GTTAACAGTA ATGGACTGCG TGGCGGTAAA
GCAGTCGAAT TAAAGGATGC TGTTTCAGAA GCGAAAGCTC TGTTGCAGCT GAGTGCGGCA
AGCGAAATGC TTGATGAGCT GATTGATTTA GCTCAGCGTA CTGAAGAAAA ATATCGCGCT
ATTCTTCACG CGCGGGCGCA GTTGGACACA AGCGATCTCA TTCGCACCAC GCTGCGTCTA
TTCAAGCAGA ATCCTGCTCT TGCGCGCACC TATACCGAGC GCTTCAAGCT GATTATGGTT
GACGAATTTC AGGACACCAG CCAGCTACAG ATAGACCTCA TCGAGTTTAT TACCGGTGCT
GACAAGCACA ACCTGTGCAC GGTTGGCGAT TCCCAGCAGA GTATCTACCG TTTCCAGGGA
GCCGATGTCG AAGTTTACCT GCGCCACAAG CGCGACATGC TTTCCGACGC GGTGGGAGCA
CGCATCGAAC AGCTCGACGA CAACTTCCGA AGCCATGCCG ATGTGCTTGC CCTGGTGCGG
CGTATCTGTG GGCAGAAAGG CTACTTTAGC GAAGAATTCC TCGACTTAAA AGCTGCTGGA
CCAGGTAAAA CGTGGTTAAG TAGCGACTCG CGTATTGAAA TGGCTCTCAC CCGTTGTACC
TCCGCTGAAG CAGGCGCGCG CTGCGAGGCA GCACATATTG CACGGCGTTT TGCAGCACTG
CGACAGGCAG GGCACAAAGC CCGCGATATG GTTGTCTTGA TGGGGAGCAC TACCGCGTCA
GATATCTATG CGCAAGCACT GCGTGATGAA GGCCTTCCCT GTATTGTTGC TGGTGGATCA
AAGTTTTTCG AAGCGCCTTG GGTTGATTTG TGTCAGCGCC TGGTTAATGT GCTCGCCAAT
CCCTATGATT CGGAAAGTTT GCTCATGGTC TTAACGAGTG AATTGCTTCC TGTGTCTTCC
GATGATTTGC TCTTTCTGGC TACCTACCAC AACGAAGTCA CGGGCGATGC TGTCCGCCAG
AACCCTGCAG TGGGCCTTTT GCGTGCTGAC CGTGCGCCCT TCATTGCATC GGAATTGCTC
GACCATGCTA CCGACGTACT CAAACGGGCT TGGCAATCTT TGGGAAGCCA GCGTCCGCGC
GACGTATTTA TGCAGGTAAT TCTTGAATCA GGATGGCTTG CATGCCTTGA AAAGCAAGGT
GCGGAAGGAC AAGCGATTGC GGCTGATATT CTCAAGTTTG CACGCCTTAT CGAAGAAGAG
TCGTACGCAA ACGGGTTCGA TATGGCGCGT GTCGCCCGTG CTCTCGAGCA TCGCCGTACA
CTGAGTTCTG AAAAGCCGGG AGCGCTTACT ATCGAAGGCT CTGACGCGGT ACGCATTATG
ACGGTGCATG CTTCAAAAGG GCTTGAATTC CCCATTGTTG CTATTGCCAA TTGCTACACC
ACACGCACGA CCGGTGAAAG GCCATATATG CTTACTGACC AGGGAAAGAT CGCCCTTACG
TTGCCGCCTT CTGACTTGAA AGCGCCCAAG CTACCTGAAG AACTCGCCGA TGCAACAACG
CCTTTCGAGG CCACCAATCA GTTGGAATTT CTCCAACTAA TACGAAAGAT CGATACCGAT
CGCAAGTATG CAGAGCGCAA GCGCCTGTTC TATGTGGCTG CCACGCGAGC AAGCGACGCA
GTTATCGTGT GCCTCAAGCA CAAACTGAAA AAAGATGGAT CGCCCCAAGA ATATAAGCAG
GTTGAACGTG ACCTTCTTAA CGGTCTCTTC CCTGGGGAAG CTGATTTCCC TCTTGAAAGT
GGGACATTTG AGTATGGCGA AAGTGAGCCG GGGGTGTTTA CCTGTTTAAC GGCAGCAGAA
GACGATGCGG CAGGCACACA AGTCGCTCCT GTGCAGACTG ATGCACAAGC TGACACGCAA
GCAAATACAC GAGCCGATAC ACAAGCTGGT ACACAAACCG GCACAGACAG TCACACCGAT
ACGAATGCGC AACCTGACAC AACTATTCAC ACCGAAGCGA ACGCACGTAC CAGTGTAAGT
GCTTGCCTCA GCGCGCATGC CGATGAAGCA GCCCTGCCTT CAGATGATTC TTTCGAGCAC
CATCGTATTG CTCTGCCAGA GCTTGAGAGC AAAACTGCCC TCGTAACGTA CCCACTAGAT
GACCGAAGCG ATTTCTTCTC GTATACCTCG CTTGCAGCTG GCGCAACGCA CGCTCAAACC
GATGAAGCTA CATCCGGTGT AACCATTTCC GATGTCGCTA ACACCAACAT AGTTGGCACT
ACAGCTGATG CTGCCAAAAC CAGCACGGTT AGCACAGCTG CCACTCCTGT CAAGACAGAT
CCTGCTGATG TAACCCCTGC TGAAACTGTT TCTGCTTATA TCGCAGATAT AAAAAACGAG
CAGCTACCAG GCAGTATCGC CACCGGACGC CATCAAGTTG AAGATGATGC AACCGCATTT
GGGTCGGCCG TTCACCAGAC CTGTGAATGG CTCGCCTTAC AGCCAGTACT ACCCAGCTCA
GATGAACTAG CCGCTGCTAT CAAGCGCTTT TCACTTCTAT GGCATGTCTC CGATGTACCT
CGTGTGCACA CAGCAGTGTC AAACTGGCTC AACAGCTCTC TTTGCAAGCA GGCATTTTCC
TTCCCACAGC ACAGTCCTGA AGTGCCCTTT ACCATCCTTG TGGGCAATGA AGTGCTTGAG
GGCGAAATTG ACCTCCTCTG CACGGGGACT CACCCACGCA AAACTAAGGG GCATGCGGCA
AGCGCAGACG ACTGCGCCTT TATCGTCGAC TATAAAACCG GTGGATCGCC TCTTGAAACG
CCCGAGCAAC TTTCTGCAAA GCATCTGCTT CAGGCACAAT GCTATGCGTA TGCTGCTTTG
CAAAATGGAT TCTCGCACGT CGAAGCGCAT TTCATTCGCC TTGAGCAGCT TTCCGACAGC
GGAGAACCTC AAACGATCAG TTACTCTTTC GACAGAAGCA ATCTTTCAGA ACTAGAGCGT
CTTATTCTTG CCGCACGTAA GGCTGCCCAA CAGGCAATCA CTCAGACTAT AACCGCTCAG
CAAGACTAA
|
|---|
| Protein sequence | MDLSRLRPGQ LASIKHLDGP LLICAGAGSG KTFTLTQRIT WALLPGSGTN GSSFLNSIDE
ALVITFTNKA AGEIKDRIRA ALRAEGMMTE ALKVDGAWIS TIHGMCSRIL REHALEADLD
PAFELAMGAD CQMARTEACA CVLEEVKETD DNAYQALFAG FRTTQALEDS IGRLLDEVSY
QTDGFASLDR GPDPAQASDV VRKVLAACEA TIACGTDKNR ATAQALADAL NDLIAKNHVT
PETLLDALNA VNSNGLRGGK AVELKDAVSE AKALLQLSAA SEMLDELIDL AQRTEEKYRA
ILHARAQLDT SDLIRTTLRL FKQNPALART YTERFKLIMV DEFQDTSQLQ IDLIEFITGA
DKHNLCTVGD SQQSIYRFQG ADVEVYLRHK RDMLSDAVGA RIEQLDDNFR SHADVLALVR
RICGQKGYFS EEFLDLKAAG PGKTWLSSDS RIEMALTRCT SAEAGARCEA AHIARRFAAL
RQAGHKARDM VVLMGSTTAS DIYAQALRDE GLPCIVAGGS KFFEAPWVDL CQRLVNVLAN
PYDSESLLMV LTSELLPVSS DDLLFLATYH NEVTGDAVRQ NPAVGLLRAD RAPFIASELL
DHATDVLKRA WQSLGSQRPR DVFMQVILES GWLACLEKQG AEGQAIAADI LKFARLIEEE
SYANGFDMAR VARALEHRRT LSSEKPGALT IEGSDAVRIM TVHASKGLEF PIVAIANCYT
TRTTGERPYM LTDQGKIALT LPPSDLKAPK LPEELADATT PFEATNQLEF LQLIRKIDTD
RKYAERKRLF YVAATRASDA VIVCLKHKLK KDGSPQEYKQ VERDLLNGLF PGEADFPLES
GTFEYGESEP GVFTCLTAAE DDAAGTQVAP VQTDAQADTQ ANTRADTQAG TQTGTDSHTD
TNAQPDTTIH TEANARTSVS ACLSAHADEA ALPSDDSFEH HRIALPELES KTALVTYPLD
DRSDFFSYTS LAAGATHAQT DEATSGVTIS DVANTNIVGT TADAAKTSTV STAATPVKTD
PADVTPAETV SAYIADIKNE QLPGSIATGR HQVEDDATAF GSAVHQTCEW LALQPVLPSS
DELAAAIKRF SLLWHVSDVP RVHTAVSNWL NSSLCKQAFS FPQHSPEVPF TILVGNEVLE
GEIDLLCTGT HPRKTKGHAA SADDCAFIVD YKTGGSPLET PEQLSAKHLL QAQCYAYAAL
QNGFSHVEAH FIRLEQLSDS GEPQTISYSF DRSNLSELER LILAARKAAQ QAITQTITAQ
QD
|
|---|
| |