| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_26260 |
|---|
| Symbol | |
|---|
| ID | 8374129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 2694377 |
|---|
| End bp | 2695531 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644992846 |
|---|
| Product | glycine betaine/L-proline transport ATP binding subunit |
|---|
| Protein accession | YP_003150343 |
|---|
| Protein GI | 256826383 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
|---|
| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 0.560056 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.199017 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCT TCGAGGGCGT GAGCAAGCGT TTCGGCAACG GGACCGTGGC CGTGGACGAC
CTGACCCTGG AGTGCCCCAC AGGGCAGATC ACAGTGCTGG TCGGGCCGTC GGGCTGCGGC
AAGACGACGA GCCTGCGGAT GATCAACCGC ATGGTCGAGC CGTCCGACGG CCGGATCCTG
ATCGACGGGC GCCCGAACAC GGACCTCGAC GCGAACGAGC TGCGCCGCAC CATCGGCTAC
GTCATCCAGC ACGGCGGGCT GTTCCCGCAC CAGACGGTGC TGCGCAACGT CATGACGGTG
CCCCTGCTGG TCGGTTGGAG CAAGCAGAAG GCCCGCTCCC GGGCGCTGGA GCTGCTTGAG
CGGGTGGGGC TCGACCCGGA CCTCGCCCAG CGCTACCCCG CCCAGCTCTC CGGCGGGCAG
CAGCAGCGCG TCGGGGTGGC CCGGGCCCTG GCCGCCGACC CGCCGGTGAT GCTCATGGAC
GAGCCGTTCA GCGCGGTCGA CCCCATCGTG CGCGAGCGGC TGCAGGAGGA GTTCCTGCGC
CTCCAGGACG AGATCGGCAC CACCATCGTG CTGGTCACCC ACGACATCGA CGAGGCCATG
CGGCTGGGGG ATCAGGTCGC GATCCTGCGG GAGGGCGGCC ACCTGGCGCA GGTCGACTCC
CCGGCGCGCG TGATGGCCCG TCCCGCCGAC GACTTCGTGG CCGACTTCGT GGGGCGCGAC
CGCGGGTACC GCTCCTTGGC CTTCCACACC GGGGAGGTGC CGCTGCAGCG GGAGGACGCG
GTCCGCATCG GCGAGCCGCT GCCGCGCGGG GCCGACTGGG TGCTCGCGGT CGACGACGAC
TCCCACCCGC TGGGGTGGCT GCGGGCCGAT GCGGGCGGCA CGGCCCGGGA GGGTGAGCTG
CGCTTGGGGG GCACGCTCGC CCGCCGCGAC GGGTCGTTGC GGGCCCTGCT CGACGCGGCG
CTGTCCTCCC CGAGCCAGCG CGGCGTGGTG GTGGACGACG ACGGACGGCT GCTGGGGACG
GTGCGTCCGC ACGACGTGCT CGACGTCATC ACGCAGACCG ACCGCGCCGA CCCGGCCTCG
CGCCACGAGG ACGAGCCCCG TCCCGAGCAG CCGAGGCGGG AGGACGCTGA CGCCGCCGCG
GGGGGTGCGC CGTGA
|
|---|
| Protein sequence | MIRFEGVSKR FGNGTVAVDD LTLECPTGQI TVLVGPSGCG KTTSLRMINR MVEPSDGRIL
IDGRPNTDLD ANELRRTIGY VIQHGGLFPH QTVLRNVMTV PLLVGWSKQK ARSRALELLE
RVGLDPDLAQ RYPAQLSGGQ QQRVGVARAL AADPPVMLMD EPFSAVDPIV RERLQEEFLR
LQDEIGTTIV LVTHDIDEAM RLGDQVAILR EGGHLAQVDS PARVMARPAD DFVADFVGRD
RGYRSLAFHT GEVPLQREDA VRIGEPLPRG ADWVLAVDDD SHPLGWLRAD AGGTAREGEL
RLGGTLARRD GSLRALLDAA LSSPSQRGVV VDDDGRLLGT VRPHDVLDVI TQTDRADPAS
RHEDEPRPEQ PRREDADAAA GGAP
|
|---|
| |