Gene Ksed_25950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_25950 
Symbol 
ID8374098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2666194 
End bp2668584 
Gene Length2391 bp 
Protein Length796 aa 
Translation table11 
GC content74% 
IMG OID644992816 
ProductDNA polymerase III, subunit gamma/tau 
Protein accessionYP_003150318 
Protein GI256826358 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCG CCTTGTACCG CCGCTACCGA CCGCAGAACT TCTCCGAGGT CGTGGGGCAG 
GAGCACGTCA CCGGCCCCCT GCAGCAGGCG CTGCGCACCG GGCGGGTGAA CCACGCCTAC
CTGTTCTCCG GGCCGCGCGG CTGCGGCAAG ACCACCAGCG CCCGCATCCT GGCGCGCTGC
CTCAACTGCG AGCAGGGCCC CACCGACTCC CCGTGCGGCG AGTGCGACTC CTGCCAGGAC
CTGGCGCGCG GCGGTGCGGG CTCGGTCGAC GTCATCGAGA TCGATGCGGC GAGCCACGGT
GGCGTGGACG ACGCCCGCGA CCTGCGCGAG AAGGCCTCGT TCGGCCCGGC CCAGTCGCGC
TACAAGGTCT ACATCATCGA CGAGGCGCAC ATGGTCACCT CGGCGGGCTT CAACGCGCTG
CTGAAGATCG TGGAGGAGCC GCCGGAGCAC GTCCTGTTCA TCTTTGCGAC GACGGAGCCG
GAGAAGGTCA TCGGCACCAT CCGGTCGCGC ACGCACCACT ATCCCTTCCG GCTGGTGCCG
CCGGCCGTGC TGCAGGAGTA CCTGGCACAG GTGTGTGAGC GCGAGGGAAT CACCGTGGAG
CCTGGCGTCC TGTCCTACGT GGTGCGCGCC GGGGGCGGGT CGGTGCGTGA CTCGATGTCG
GTGCTCGACC AGCTGATCGC CGGGTCGGAC GACGCCGGCA TCACCCTGGC GGGCACGACC
GCCCTGCTGG GTTTCACCGA CAGCGAGCTG CTCGATGGGG TGGTCGACGC CTACGCCGCC
GGCGACGGTG CGTCGCTGTT CACCACGGTG GAGCGGGTGG TCGAGTCCGG GCAGGACCCG
CGGCGCTTCG TGGAGGACCT CTCGGAGCGG ATGCGGGACC TCATCCTGGT GAACGCGGTG
CCGACCGGGA CCGAGGCGGT GCTGCCGGGC GTGCCCTCCG ACCAGCTGGA CCGGCTGCGG
GTGCAGGCGA GCGGGCTGGG CCCGGCGGAG CTCTCCCGCG CTTCCGACGT GCTCTTCCAC
GGGTTGGCGG AGATGACCGG CGCCACCTCA CCGCGGCTGC AGCTGGAGAT CATCATGGCG
CGGCTGCTGC TGCCCCGTGC TGCGGGGGAG GGTGGCTTCG CGGCCCGGTT GGAGAAGGTG
GAGCGGTGGA TGGCCTTCCG CGGCGACGCG TCTGCCGGTG GGACTGCCGG TGCGCAGGCC
GGCGCACCAG CGCAGGAAGC GCCGGCGTCG CAGGGTTCCC CGGTCGCGCA GAGCGCGCCG
GCGGTCCCGG CTGCGGCAGC GCCGCAGCAG GAGCAGTCCC GTGCGCAGGA GCCAGCACGC
CGGGACCAGA CCCCGCGGGA TGAACAGCGC GAGCAGGAGC AGCCGGCACG CCAGGACCGG
ACCCCGCAGG GCGAGGAGCG CGCCCAGGAG CAGCCCGCTG CGCCGCAGCC GGCAGCCGAG
CAGGCCCCGC CGGTCCCGGA TGAGCCTCCC GCCGACATGT GGGAGGCCGA GGAGGCAGCG
GCCGCCGCCG GACCGGACTC CGCCGGCGAC CGGACACCCG AGCCCGGCGC CCCGCAGCAG
GCCCAGCAGG CTGCCCCGGA AGGGTCCTCG TCGCCCGGGG CAGCCCCCGT CCCGCTGGAG
ACCCTGCGGC ACGAGTGGCC GACGGTGCTC GACAAGCTCA AGGACATCAG CCGCGTGACC
TGGGCCCTGG TGTCCCAGTC CATGCAGGTG CAGGACCTCA GCTCCGAGGG GCTCACGCTC
GCCACCGAGG TGGCCCCCAT CGCGGAGCGC TTCTCCCGCG GGGAGAACGC CGACCGGGTG
GCGGCCGCGG TGCAGGAGGC CCTGGGCTTC CACCCGCGCG TCCGCTGTGT CGTGGGGGGC
CCCGGTGACG GTGGCCAGAG CGGCTCTGGT GGGCCCGGGG GCGCGGGCGC CCCCGGCGGC
CCGGGAGGTC GCGGTCCCGG TGGCACCGGT GGTGCCCCGG GCGGTCCGGG TGCCGGTGGC
GTGTCAGGCC TGCCGTCCGC GCCGGACCCC GTGGGTTCTC CGGCCTGGGG TCAGCGCACG
GACGACGCTC CGGATTGGGC GACCGGTGAC CTGCCCGCCC CCAGGCCCGG CCCCGGTGCG
GGCCAGGGCG GCGACGGTGC AGCCCCCGCA GGTGCCATGC CCCCACCAGC GGGTGAGCCG
ACCCCCGGCG CAGCTGCGGG GACCGCACCC ACCGACGCTC CCGCATTGGC GCCCGGCGGT
GGGGCGGGAA CGGACCCCGA CCCGTCGGAG GCGACGCCCG AGGAGGACGG TGTGGAGTTC
ACGCCGGACT ACGCCGACGA GACGGTGGAG TCGGTCGGCA TGGTGGGCAC GGCTGCCATC
GAGAAGATCC TCGGTGGCAC CGTGATCGAG GAGCACTCGG ACCAGGCATA G
 
Protein sequence
MSTALYRRYR PQNFSEVVGQ EHVTGPLQQA LRTGRVNHAY LFSGPRGCGK TTSARILARC 
LNCEQGPTDS PCGECDSCQD LARGGAGSVD VIEIDAASHG GVDDARDLRE KASFGPAQSR
YKVYIIDEAH MVTSAGFNAL LKIVEEPPEH VLFIFATTEP EKVIGTIRSR THHYPFRLVP
PAVLQEYLAQ VCEREGITVE PGVLSYVVRA GGGSVRDSMS VLDQLIAGSD DAGITLAGTT
ALLGFTDSEL LDGVVDAYAA GDGASLFTTV ERVVESGQDP RRFVEDLSER MRDLILVNAV
PTGTEAVLPG VPSDQLDRLR VQASGLGPAE LSRASDVLFH GLAEMTGATS PRLQLEIIMA
RLLLPRAAGE GGFAARLEKV ERWMAFRGDA SAGGTAGAQA GAPAQEAPAS QGSPVAQSAP
AVPAAAAPQQ EQSRAQEPAR RDQTPRDEQR EQEQPARQDR TPQGEERAQE QPAAPQPAAE
QAPPVPDEPP ADMWEAEEAA AAAGPDSAGD RTPEPGAPQQ AQQAAPEGSS SPGAAPVPLE
TLRHEWPTVL DKLKDISRVT WALVSQSMQV QDLSSEGLTL ATEVAPIAER FSRGENADRV
AAAVQEALGF HPRVRCVVGG PGDGGQSGSG GPGGAGAPGG PGGRGPGGTG GAPGGPGAGG
VSGLPSAPDP VGSPAWGQRT DDAPDWATGD LPAPRPGPGA GQGGDGAAPA GAMPPPAGEP
TPGAAAGTAP TDAPALAPGG GAGTDPDPSE ATPEEDGVEF TPDYADETVE SVGMVGTAAI
EKILGGTVIE EHSDQA