Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_23000 |
Symbol | |
ID | 8373803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 2386481 |
End bp | 2387413 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644992535 |
Product | nucleoside-diphosphate-sugar epimerase |
Protein accession | YP_003150041 |
Protein GI | 256826081 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.109037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0324264 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGTCC TGCTCACCGG GGCCGGTCAG ATCGGCTCGG CCCTCATCCC CGTCCTGCAG GCCGCGGGCG ACCGCGTCAC CGTCCTGCGC CGCCATGGCC CCGACCTGCC CGCCACCCGC ACCCTCCGCG GCGACGCCGG CGACCGCGAC CTGCTGCGGC AGCTCGCCGC GACCGACCCG CCCCAGGCCG TCCTGCACAC CGTCCACGCC GCCTACGACC ACCGCACTTG GCGCGCGGAG CTCCCCGCCC GCGAGACCGC GGTGATGGAC CTGGCCGGGG AACTCGGTAT CCCCGTGGTG TTCCCCGAGT CCGTCTACGC ATGGGGTCAC GCCGCACAGA ACCTCGTCGA GGGCACCGCT CCCGACCCCT GCAGCCCCCT GGGAGCGGTG CGCGCCGAGC TGCTCGCGGC ACGCGCGGGG CACCCGGCCA CCACCCTCAG CATCGTGGCC GCCGACCTCA TCGGACCCAC GGCCACCGCC GCGGGCTCGG TCGCCACGGC GCTCGTGGTC GGCCCCGTCG CACGAGGGCG CCGCGCCTGG TTCCCCGGCG ACCCCGACGT CCCCCACGCC CTGACCCACC TGCCGGACCT CGCGGCATCG ATGCGGCACG CCGCCGCGCA CGCCACCCGG CTGGCCCCCG GTGGCCAGGC GGTGCTGCAC GCGCCCACAC CCACCTCTCG GAGCCTCCGC GACCTAGCCG ATGCGGTGGC TCGAGCGCGC GGCGACGACC GCCCACCGCG CGTGACCTCC CTGCCCACCT GGCCGCTCGC GGTCGCTGGC ATGGCCGCGG CCTCGGTGCG GGAGCTGCAC CGCATGCGCT ACCTGTGGAC CGCCCCGTCG CACCTGCGGC CGGGCGCGCT CACCCAGCAG GAGGGGCTGG CGCCCACGCC GTGGGAGCCG GTGGTGCGCG GCGCCATCGA GGCTGTTCGA TGA
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Protein sequence | MHVLLTGAGQ IGSALIPVLQ AAGDRVTVLR RHGPDLPATR TLRGDAGDRD LLRQLAATDP PQAVLHTVHA AYDHRTWRAE LPARETAVMD LAGELGIPVV FPESVYAWGH AAQNLVEGTA PDPCSPLGAV RAELLAARAG HPATTLSIVA ADLIGPTATA AGSVATALVV GPVARGRRAW FPGDPDVPHA LTHLPDLAAS MRHAAAHATR LAPGGQAVLH APTPTSRSLR DLADAVARAR GDDRPPRVTS LPTWPLAVAG MAAASVRELH RMRYLWTAPS HLRPGALTQQ EGLAPTPWEP VVRGAIEAVR
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