| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_22920 |
|---|
| Symbol | |
|---|
| ID | 8373795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 2375776 |
|---|
| End bp | 2376933 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644992528 |
|---|
| Product | transposase, IS30 family |
|---|
| Protein accession | YP_003150034 |
|---|
| Protein GI | 256826074 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.200558 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGGCA AGCACGGTCA TCTCAGTCGG GAGCAGAAGC AGCTCGCGCT CAGGTTGCAT
GCCAAGGGCT GGCGGCTGGT CGACATCGCG AAGGAGGTCG GTTGCAGCGC GCCGATGGTT
GGCATCATGG CCCGCGCTGG CAGGCACGTC GAGGCCAGGC CGTTCGGCTG GGAACCACGT
CACGGCTGCC TGAGGATCGA CGAGCGCGAG CAGATCCTGA TCGGGATCAA CCGCGGCGAC
ACCTTCACGG CGATCGCGCG CCAGCTGGGT CGGGCCGTGT CCACTGTCAG TCGCGAGGTG
AAGCGCGGTG GTGGCCGAGC CGGGTACTCG GCCTGGCACG CCCACGAGCA TGCCCGCGAG
CAGGCTCGAC GGCCCAAGCG GTTCAAGCTC GCACCGGGCC GACTCCTCGA GGAGGTGGCC
AAGCGTCTCG AGCAGCTGTG GTCACCCCAG GAGATCGCCG CGCGCCTCCG GTTGGATCAC
GCCGACGACC CGGAGATGCG CGTGAGCCAC GAGACGATCT ACCAGTCGCT GTTCGTGCAG
GGACGCGGCG AGCTGCGTCG CGAGCTGGCC CGGTGCCTGC GGTCCGGCCG CGCCACTCGC
AGGCCCCGTG GGACCACCGA CGGCCGTGGC CGAATCCCCG GCATGGTGAT GCTCAGCGAG
CGTCCTGGCG AGGCAGATGA CCGTGCAGTA CCGGGTCACT GGGAAGGCGA TCTGATCCTC
GGGGAAGGCA GCCGCAGTGC AGTCGGCACC CTCGTGGAAC GATCCACCCG GATGACGCTC
TTGCTGCACC TGCCAGACGG GAAGAGCGCT GAGCAGGTAG AGGCCGCGAT GCGTGAAGCG
ATCACGACGT TGCCCACGTC ATTGGCCAGG ACGATCACGT GGGACCAAGG CGCCGAGATG
TCCAAGCACG CCGCGTTCAC CACGGCCACC GGGATCCCGA TCTACTTCTG CGACCCGCAC
TCGCCGTGGC AGCGTGGCAG CAACGAGAAC ACCAACGGGC TGCTGCGCCA GTACCTCCCC
AAGGGCAGTG ACCTGAGCAC CGTCACCCGC GAGGAGCTCG ACGCGATCCA GGACAGCCTC
AACGGCCGGC CACGCAAGAC GCTGGGCTAT CTGACACCAT CAGAGAAGCT CGCAGAGTTC
CTTGCGCCCA CCGCTTGA
|
|---|
| Protein sequence | MQGKHGHLSR EQKQLALRLH AKGWRLVDIA KEVGCSAPMV GIMARAGRHV EARPFGWEPR
HGCLRIDERE QILIGINRGD TFTAIARQLG RAVSTVSREV KRGGGRAGYS AWHAHEHARE
QARRPKRFKL APGRLLEEVA KRLEQLWSPQ EIAARLRLDH ADDPEMRVSH ETIYQSLFVQ
GRGELRRELA RCLRSGRATR RPRGTTDGRG RIPGMVMLSE RPGEADDRAV PGHWEGDLIL
GEGSRSAVGT LVERSTRMTL LLHLPDGKSA EQVEAAMREA ITTLPTSLAR TITWDQGAEM
SKHAAFTTAT GIPIYFCDPH SPWQRGSNEN TNGLLRQYLP KGSDLSTVTR EELDAIQDSL
NGRPRKTLGY LTPSEKLAEF LAPTA
|
|---|
| |