Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_22920 |
Symbol | |
ID | 8373795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 2375776 |
End bp | 2376933 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644992528 |
Product | transposase, IS30 family |
Protein accession | YP_003150034 |
Protein GI | 256826074 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.200558 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGGCA AGCACGGTCA TCTCAGTCGG GAGCAGAAGC AGCTCGCGCT CAGGTTGCAT GCCAAGGGCT GGCGGCTGGT CGACATCGCG AAGGAGGTCG GTTGCAGCGC GCCGATGGTT GGCATCATGG CCCGCGCTGG CAGGCACGTC GAGGCCAGGC CGTTCGGCTG GGAACCACGT CACGGCTGCC TGAGGATCGA CGAGCGCGAG CAGATCCTGA TCGGGATCAA CCGCGGCGAC ACCTTCACGG CGATCGCGCG CCAGCTGGGT CGGGCCGTGT CCACTGTCAG TCGCGAGGTG AAGCGCGGTG GTGGCCGAGC CGGGTACTCG GCCTGGCACG CCCACGAGCA TGCCCGCGAG CAGGCTCGAC GGCCCAAGCG GTTCAAGCTC GCACCGGGCC GACTCCTCGA GGAGGTGGCC AAGCGTCTCG AGCAGCTGTG GTCACCCCAG GAGATCGCCG CGCGCCTCCG GTTGGATCAC GCCGACGACC CGGAGATGCG CGTGAGCCAC GAGACGATCT ACCAGTCGCT GTTCGTGCAG GGACGCGGCG AGCTGCGTCG CGAGCTGGCC CGGTGCCTGC GGTCCGGCCG CGCCACTCGC AGGCCCCGTG GGACCACCGA CGGCCGTGGC CGAATCCCCG GCATGGTGAT GCTCAGCGAG CGTCCTGGCG AGGCAGATGA CCGTGCAGTA CCGGGTCACT GGGAAGGCGA TCTGATCCTC GGGGAAGGCA GCCGCAGTGC AGTCGGCACC CTCGTGGAAC GATCCACCCG GATGACGCTC TTGCTGCACC TGCCAGACGG GAAGAGCGCT GAGCAGGTAG AGGCCGCGAT GCGTGAAGCG ATCACGACGT TGCCCACGTC ATTGGCCAGG ACGATCACGT GGGACCAAGG CGCCGAGATG TCCAAGCACG CCGCGTTCAC CACGGCCACC GGGATCCCGA TCTACTTCTG CGACCCGCAC TCGCCGTGGC AGCGTGGCAG CAACGAGAAC ACCAACGGGC TGCTGCGCCA GTACCTCCCC AAGGGCAGTG ACCTGAGCAC CGTCACCCGC GAGGAGCTCG ACGCGATCCA GGACAGCCTC AACGGCCGGC CACGCAAGAC GCTGGGCTAT CTGACACCAT CAGAGAAGCT CGCAGAGTTC CTTGCGCCCA CCGCTTGA
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Protein sequence | MQGKHGHLSR EQKQLALRLH AKGWRLVDIA KEVGCSAPMV GIMARAGRHV EARPFGWEPR HGCLRIDERE QILIGINRGD TFTAIARQLG RAVSTVSREV KRGGGRAGYS AWHAHEHARE QARRPKRFKL APGRLLEEVA KRLEQLWSPQ EIAARLRLDH ADDPEMRVSH ETIYQSLFVQ GRGELRRELA RCLRSGRATR RPRGTTDGRG RIPGMVMLSE RPGEADDRAV PGHWEGDLIL GEGSRSAVGT LVERSTRMTL LLHLPDGKSA EQVEAAMREA ITTLPTSLAR TITWDQGAEM SKHAAFTTAT GIPIYFCDPH SPWQRGSNEN TNGLLRQYLP KGSDLSTVTR EELDAIQDSL NGRPRKTLGY LTPSEKLAEF LAPTA
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