Gene Ksed_22850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_22850 
Symbol 
ID8373788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2367467 
End bp2368954 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content76% 
IMG OID644992521 
Producthypothetical protein 
Protein accessionYP_003150027 
Protein GI256826067 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms 
COG ID[COG2508] Regulator of polyketide synthase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.450672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACA TCAACCTCGC CGCGCTGACG GCCCACCCCT CGGCCGGCGC GTTCACCGTG 
GCCGCTGATG CGGGGGCGCA GTGGGCGGCG GTCCACGCGG TCACCGACGT CGCGGACCTG
TGGGAGACCG TGCTCGAGAA CCCGGCGCGC GTGCTGGTCG TCGTGCTTGC CGGCGGGCCG
GGCAGCGACT GGGAGCGCGA CGCGCTGGTG CGGCGGGTGG CCGATGCCGG CTACCGGGGG
CTGGCGCTGC CGGCCGGGCG CACTGACACC CACACCGGCG ACCTCGCGCG GCGTCTCGGG
GTCACGCTGC TGCGCGTGGA GGAGCCGGTG GAGTTCCTGC GGGCCTGCTG GCAGCTGTGC
CAGGCGGGGG ACTCGCTGAC GCTGCAGCAC GTGCGCAAGT CCGTGCAGGC GACGCAGTAC
CGGGCGGCGC ACCTCAGCGA CCTGCTGCGG CACCTCTCGG CGGGGCTGGG GCACTCGCTG
GCGGTCGTGC GGGCCGACGA GGTGGTCGCG CAGGTGGGGG ATCCGGTGCC GCCGGCCGTG
GTGGCGCGCC GGCCGGAGCG CTGGCTCAGC GCGCGGTGCG AGGGAGACGT GGGGGCGGTG
TCCCTGCCAC TGCAGGGGGC GCGGCACGGG TGGCGGCTCA TCGTGCACGG CCGCGGCTGG
AGCGAGGGGC AGCTGCACGC GGTCGCCACA GCCGCCGAGG TCGCCCTGCC CGCCGTGGCT
GCGCGCATCC TGCTGGACGA CGCCGAGAAC GTCGGCGACG CCGCTCGCGC GAGCACGCTG
CTGACGGCCG TCATCGATGC GGATGGTGAG GTGGACCCCG CGCTGGAGGA GCGACTGGTG
GCGCAGAAGT GGCGGTTGGC CGGGCCGCTG CGGGCTGTGC ACGTGGTGGC CCGGGAGCGC
ACCGACCCGG TGGGGATGCT GCGGCTGGTG CTCGGGGAGG TCGGTGCGGC GCAGGCGGTG
AACGGGGCGC TGCACGGTGA CGGTGTGACC TGCTGGGTGC AGGCGCCCCC CGGGGAGGAC
CCGGTGCCGC TGCTGCGGGA CGCGCACCGA CGCATCCGCA GCCAGATGAG GTGCTCGACC
GGGGTGGGCT CGGTGGGTGA GGGGCCGGCC GGGCTGGTGG CGAGCATCCA CCAGGCCTGC
GATGCCGCCC GGCTGGCCGC CGACCGCGCC TCGGCCGAGT GGTTCATGGC CCTGGACGGC
ACGAGCCCGG CGCAGCTGCT GCGGGCGTGG ACGCAGCCCG ACACGTTCGT GGACACGGCC
CGGCAGGCGC TGGCGGAGCT CACGGCGGAC GAGCTGCTGA CCCTGGCGGC CTACCTGGAC
CAGGAGTCGT CGGTGGCCGG CACCGCCGCG GCGCTCGGGG TGCACCGCAA CACGATCCTG
CCCCGGCTGC GGCGCATCGA GGAGCGGTTG GGGGCGAGCC TGACCGACGC GGACACCCGT
CTGGCGCTGC ACCTGGCCAC GAGGGTGAGC ACGTCCGGGG AGGGGTGA
 
Protein sequence
MSDINLAALT AHPSAGAFTV AADAGAQWAA VHAVTDVADL WETVLENPAR VLVVVLAGGP 
GSDWERDALV RRVADAGYRG LALPAGRTDT HTGDLARRLG VTLLRVEEPV EFLRACWQLC
QAGDSLTLQH VRKSVQATQY RAAHLSDLLR HLSAGLGHSL AVVRADEVVA QVGDPVPPAV
VARRPERWLS ARCEGDVGAV SLPLQGARHG WRLIVHGRGW SEGQLHAVAT AAEVALPAVA
ARILLDDAEN VGDAARASTL LTAVIDADGE VDPALEERLV AQKWRLAGPL RAVHVVARER
TDPVGMLRLV LGEVGAAQAV NGALHGDGVT CWVQAPPGED PVPLLRDAHR RIRSQMRCST
GVGSVGEGPA GLVASIHQAC DAARLAADRA SAEWFMALDG TSPAQLLRAW TQPDTFVDTA
RQALAELTAD ELLTLAAYLD QESSVAGTAA ALGVHRNTIL PRLRRIEERL GASLTDADTR
LALHLATRVS TSGEG