Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_22170 |
Symbol | |
ID | 8373720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 2295198 |
End bp | 2297462 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644992459 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_003149965 |
Protein GI | 256826005 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.366718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.398515 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCT TCCCCACCTT CCACGACCTG CCCGCCCCGG AGGTTCCCAC CTCCCACGAC CTGGCCGGCC CGGAGGGTGG GCTCCGCACC GGTGGTGATC TCGACGGTCC AGCTCCGCAC CGGTCCGGAG CTGGCGGTAC CACCACCGGC ACCACCGCCG AGCGCGAGCC GTGGACCACG CCCGAGGGCA TCGACGTCCC GCCGCTCTAC ACCGAGCAGG ACCTGGAGCA GCTCGACTTC CTGGACACCG TGCCCGGCGC CCCGCCGTAC CTGCGCGGGC CCTACCCGAC CATGTACGTC AACCAGCCGT GGACGATCCG CCAGTACGCG GGCTTCTCCA CCGCGCAGGA GTCCAACGCC TTCTACCGAC GCAACCTCGC GGCCGGGCAG AAGGGCCTCT CGGTGGCCTT CGACCTCGCC ACCCACCGCG GCTACGACTC CGACCACCCC CGGGTGTCCG GTGACGTCGG CATGGCCGGG GTGGCGATCG ACTCGATCCT GGACATGCGC CAGCTCTTCG ACGGCATCCC GCTGGACCGC ATGAGCGTCT CCATGACCAT GAACGGCGCG GTGCTGCCCA TCCTGGCGCT GTACGTCGTC GCGGCCGAGG AGCAGGGGGT GAGCCAGGAC CAGCTCTCGG GGACCATCCA GAACGACATC CTCAAGGAGT TCATGGTCCG CAACACCTAC ATCTACCCGC CCGAGCCGTC GATGCGGATC ATCAGCGACA TCTTCGCCCA CACCAGTGAG CACATGCCGC GGTTCAACTC GATCTCCATC AGCGGGTACC ACATCCAGGA GGCCGGGGCC ACGCAGGACC TTGAGCTCGC CTACACCCTG GCCGACGGCG TGGAGTACCT GCGCGCCGGC ATCGAGGCCG GGCTGGACGT GGACAAGTTC GCCCCCCGCC TCAGCTTCTT CTGGGCCATC GGCATGAACT TCTCGATGGA GGTGGCCAAG CTCCGCGCCG CGCGCCTGCT CTGGGCCCGC CTCGTGCGCC AGTTCGAGCC GAGGAACCCC AAGTCGATGT CGCTGCGCAC CCACAGCCAG ACCTCCGGCT GGTCGCTCAC CGCGCAGGAC GTCTACAACA ACGTGGTGCG CACCGGCATC GAGGCCATGG CCGCCACCCA GGGGCACACG CAGAGCCTGC ACACGAACGC GTTGGACGAG GCGATCGCGC TGCCGACGGA CTTCTCCGCC CGCATCGCGC GCAACACCCA GCTGCTGTTG CAGCAGGAGT CCGGCACCAC GCAGACCGTC GACCCGTGGG GTGGCAGCGC GTACATCGAG ACGCTGACCC ACGACCTCGC GCAGCGGGCC TGGGCGCACA TCCAGGAGGT CGAGGCCGCC GGCGGCATGG CCAAGGCGAT CGAGGCGGGG CTGCCGAAGC TCCGCATCGA GGAGGCCGCG GCGCGCACCC AGGCGCGGTT GGACTCCGGG CGACAGGCGC TCATCGGAGT GAACCAGTAC CCGGTCGACG AGGACGAGCC GATCGAGATC CTCAAGGTCG ACAACGCCCG CGTGCGCTCC GAGCAGCTCG CGAAGCTGGA GACGCTCCGC GCCGAGCGCG ACGAGGACGC CTGCCGGGAG GCACTGTCCG CGCTGACCGA GGGCGCCCGT GGGGACGGCA ACCTGCTGGC CCTGAGCATC GAGGCCGCCC GGGCGCACGC GACCGTGGGG GAGATGAGCG ACGCCATGGA AGAGGTTTTC GGCCGCTACA CCGCGCAGAT CCGCACGATC AGCGGGGTCT ACTCCCAGGA GGCTGGGCAG GACCAGGGCA TCGACGCCGC CCGGGACGCC GTCGAGCAGT TCGCCCAGGA CGAGGGCCGC CGCCCCCGCA TCCTGGTGGC CAAGATGGGT CAGGACGGCC ACGACCGCGG GCAGAAGGTC GTCGCCACGG CCTATGCCGA CCTCGGGTTC GACGTGGACG TGGGCCCGCT GTTCCAGACG CCGAGCGAGG TGGCACGGCA GGCCGTGGAG GCCGACGTGC ACGTGGTCGG TGTCTCCTCG CTCGCGGCTG GTCACCTCAC GCTGGTGCCC GCCCTGCGCG CCGAGCTCGA CGCGCTCGAC GGCCAGGACA TCGCGATCGT CGTCGGCGGC GTGATCCCCT CCCAGGACTT CGACGAGCTC CGGGACGCGG GCGCGGACGC GATCTACCCG CCCGGCACGG TCATCTCCAC GGCGGCGCTC AACCTGGTGG AGACCATTCG CGAGCGCGTG GGCCTGGGCT CCGGGGCCGC GGACGCCGGG TCCGCCGAGG GCTGA
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Protein sequence | MSTFPTFHDL PAPEVPTSHD LAGPEGGLRT GGDLDGPAPH RSGAGGTTTG TTAEREPWTT PEGIDVPPLY TEQDLEQLDF LDTVPGAPPY LRGPYPTMYV NQPWTIRQYA GFSTAQESNA FYRRNLAAGQ KGLSVAFDLA THRGYDSDHP RVSGDVGMAG VAIDSILDMR QLFDGIPLDR MSVSMTMNGA VLPILALYVV AAEEQGVSQD QLSGTIQNDI LKEFMVRNTY IYPPEPSMRI ISDIFAHTSE HMPRFNSISI SGYHIQEAGA TQDLELAYTL ADGVEYLRAG IEAGLDVDKF APRLSFFWAI GMNFSMEVAK LRAARLLWAR LVRQFEPRNP KSMSLRTHSQ TSGWSLTAQD VYNNVVRTGI EAMAATQGHT QSLHTNALDE AIALPTDFSA RIARNTQLLL QQESGTTQTV DPWGGSAYIE TLTHDLAQRA WAHIQEVEAA GGMAKAIEAG LPKLRIEEAA ARTQARLDSG RQALIGVNQY PVDEDEPIEI LKVDNARVRS EQLAKLETLR AERDEDACRE ALSALTEGAR GDGNLLALSI EAARAHATVG EMSDAMEEVF GRYTAQIRTI SGVYSQEAGQ DQGIDAARDA VEQFAQDEGR RPRILVAKMG QDGHDRGQKV VATAYADLGF DVDVGPLFQT PSEVARQAVE ADVHVVGVSS LAAGHLTLVP ALRAELDALD GQDIAIVVGG VIPSQDFDEL RDAGADAIYP PGTVISTAAL NLVETIRERV GLGSGAADAG SAEG
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