| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_21940 |
|---|
| Symbol | |
|---|
| ID | 8373698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 2270332 |
|---|
| End bp | 2272959 |
|---|
| Gene Length | 2628 bp |
|---|
| Protein Length | 875 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644992438 |
|---|
| Product | ribonucleoside-diphosphate reductase, alpha subunit |
|---|
| Protein accession | YP_003149944 |
|---|
| Protein GI | 256825984 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.390444 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.836113 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACCA ACACCACCAC CAGCACCGCC ACGCCCACCA GCCAGCCGGC CGATGGCGAC
CAGCCCACCC TGGAGGGCGT CCCCACCACT CCCGCCCGCA CGACCATGCG GGTGGTCAAG
CGCAGCGGCG AGCACGAGCA GGTCGACGTC ACCAAGATCG TCGCCGCCGT GGAGCGCTGC
TGTGACGGCC TGCCCGAGGT GGACCCGCTG CGGGTGGCCA CCAAGACCAT CTCCGGTCTC
TACGACGGCG CCACCACCGC CGAGCTCGAC AAGCTCGCCA TCGCCACGGC CGCCGAGATG
ACCGCCACCG AGCCGCAGTA CTCCCGCCTG GCGGGCCGCC TGCTGGCCGG CGTCATCGAC
AAGGAGGTCC GCGGCCAGGG CATCGGCTCC TTCTCCGCCG CCGTCCGCAC CGGCCACGAG
CAGGGCCTCA TCGGGGACGA GACCGCCGCC TTCGTCGCCG AGCACGCCAG CCGCCTGGAC
GATGCCGTGT ACCGCGCCCA GGCCGCCCAC GCCGACTGGC GCTTCGACTA CTTCGGCCTG
CGCACCGTGT ACGACCGCTA CCTGCTGCGC CACCCCCTCA CCCGCGCGGT GGTCGAGTCT
CCCCAGTACT GGCTGATGCG GGTCTCCGCC GGGCTCTCGC ACACCGGCGA GGAGGCCGTG
GAGTTCTTCG AGCTGCTCTC CTCCCTGGCG TACCTGCCCA GCTCGCCGAC CCTGTTCAAC
TCCGGCACCC GGCACACACA GATGTCCAGC TGCTACCTCA TCGACTCCCC GCAGGACGAC
CTGGACTCCA TCTACGAGCG CTACCACCAG GTGGCCAAGC TCTCGAAGTT CGCCGGCGGC
ATCGGCCTGG CCTTCTCCCG CATCCGCTCC CGCGGCGCGC TGATCCGCGG CACCAACGGC
CACTCCAACG GCATCGTGCC GTGGCTGCGC ACGCTGGACG CCTCGGTGGC CGCGGTCAAC
CAGGGCGGCC GGCGCAAGGG CGCGGCATGC ATCTACCTCG AGCCGTGGCA CCCGGACGTC
GAGGAGTTCC TCGAGCTGCG CGACAACACC GGTGAGGACG CGCGCCGCAC CCACAACCTC
AACCTGGCCC ACTGGATCCC CGACGAGTTC ATGCGCCGCG TGGAGGCTGA TGGGCAGTGG
TCCCTCATCG ACCCCGATGC CGTGCCGGAG CTGCCCGACC TGTGGGGCCC GGCCTTCGAC
GCCGCCTACC GCGCCGCCGA GGAGCGCGGT GACGTGGTGC GCACCGTCTC GGCCCGCTAC
CTGTACGGGC GCATGATGCG GACCCTCGCC CAGACCGGTC AGGGGTGGAT GACCTTCAAG
GACGCCTCCA ACCGGGCCTG CAACCAGACC AGCGACGACC AGACGCCGCG GGTGGCCGCC
GACGGCACCG TCCAGCCGGC CCCGGTGGTG CACCTGAGCA ACCTGTGCAC CGAGATCATC
GAGGTGACCA GCAACGACGA GACCGCCGTG TGCAACCTCG GCTCGGTGAA CCTCGCGGCG
CACCTGCAGT GGTCCGACGG CACCACCGGC GTCCGCCCCA CCGACCCCGC GGCGCGCGCC
ACCGGCATCG ACACCGACCG GTTGCGCTCC ACGGTGCGGC TGGCGGTCAC CTACCTGGAC
CGCGTCATCG ACATCAACTA CTACCCCTCC GAGCAGGCGG CGGCGTCCAA CCCGCGCTGG
CGCCCCATCG GCCTGGGCTC GATGGGGCTG CAGGACGTGT TCTTCGCCCT GCGGATGCCG
TTCGACGCGC CCGAGGCGAA GGAGCTCTCG ACCCGCATCG CCGAGGAGAT CCAGCTCTCC
GCGCTGGAGC GCTCGGCCGA GCTCGCCGAG CAGTTCGGCG CCCACCCGGC GTTCGCCGAG
ACCCGGGCGG CCCGCGGCCA GTTGCAGCAC GACCTGCAGG GTGTGGAGCC GACCCAGACC
GAGCGCTGGG CGGCCGTGCG GCAGCGCATC GCCGACCACG GCCTGCGCAA CTCGCTGATG
ATCGCCATCG CGCCCACGGC GACGATCGCC AGCATCGCCG GCTGCTACGA GTGCATCGAG
CCGCAGGTGA GCAACCTGTT CAAGCGCGAG ACCCTCTCGG GGGAGTTCAT GCAGGTGAAC
ACCGCGCTGG TGGGCGAGCT GAAGTCCCTG GGGCTGTGGA CCGAGGCGGT GCGCGAGAAG
CTCAAGGCCG ACAACGGGTC CGTGGCCGGC ATCGCCGACC TGCCGGAGGA GACCCGGCGA
CTGTTCCGCA CCGCCTGGGA GCTGCCGCAG AAGGCGCTCA TCGAGATGGC CGCGGCCCGG
CAGGCGTACG TGGACCAGTC CCAGAGCCTG AACCTGTTCA TGGAGAGCCC GAACATCGGC
AAGCTGTCCT CGATGTACCT GTACGCGTGG AAGGCCGGGC TGAAGACCAC GTACTACCTG
CGCAGCCGGC CGGCCACCCG CATCCAGCAG GCCACCGTGG CCGGTGTGCG TGCCGGCGCG
AGCTGGGGCG CCGCGACGGG TGCCCCGGGC GCCAGCCAGC CCACGGCCCC TGGTTCGCCG
GGCGTGGTCG GCGGGCTCAC CGCATCGGAG CCGGTGCGGA CCTTCACCGA TGAGGAGGCG
CTCGCCTGCT CGCTGGAGAA CCCCGAGGCC TGTGAGGCCT GCGAGTGA
|
|---|
| Protein sequence | MTTNTTTSTA TPTSQPADGD QPTLEGVPTT PARTTMRVVK RSGEHEQVDV TKIVAAVERC
CDGLPEVDPL RVATKTISGL YDGATTAELD KLAIATAAEM TATEPQYSRL AGRLLAGVID
KEVRGQGIGS FSAAVRTGHE QGLIGDETAA FVAEHASRLD DAVYRAQAAH ADWRFDYFGL
RTVYDRYLLR HPLTRAVVES PQYWLMRVSA GLSHTGEEAV EFFELLSSLA YLPSSPTLFN
SGTRHTQMSS CYLIDSPQDD LDSIYERYHQ VAKLSKFAGG IGLAFSRIRS RGALIRGTNG
HSNGIVPWLR TLDASVAAVN QGGRRKGAAC IYLEPWHPDV EEFLELRDNT GEDARRTHNL
NLAHWIPDEF MRRVEADGQW SLIDPDAVPE LPDLWGPAFD AAYRAAEERG DVVRTVSARY
LYGRMMRTLA QTGQGWMTFK DASNRACNQT SDDQTPRVAA DGTVQPAPVV HLSNLCTEII
EVTSNDETAV CNLGSVNLAA HLQWSDGTTG VRPTDPAARA TGIDTDRLRS TVRLAVTYLD
RVIDINYYPS EQAAASNPRW RPIGLGSMGL QDVFFALRMP FDAPEAKELS TRIAEEIQLS
ALERSAELAE QFGAHPAFAE TRAARGQLQH DLQGVEPTQT ERWAAVRQRI ADHGLRNSLM
IAIAPTATIA SIAGCYECIE PQVSNLFKRE TLSGEFMQVN TALVGELKSL GLWTEAVREK
LKADNGSVAG IADLPEETRR LFRTAWELPQ KALIEMAAAR QAYVDQSQSL NLFMESPNIG
KLSSMYLYAW KAGLKTTYYL RSRPATRIQQ ATVAGVRAGA SWGAATGAPG ASQPTAPGSP
GVVGGLTASE PVRTFTDEEA LACSLENPEA CEACE
|
|---|
| |