Gene Ksed_21890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21890 
Symbol 
ID8373693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2264000 
End bp2265382 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content73% 
IMG OID644992433 
Productnitrate/nitrite transporter 
Protein accessionYP_003149939 
Protein GI256825979 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.392682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGGG AGCAGAACTC CCCCGCGGCC ACCGGCCGCA CGCCGTCCGC TGCCCCGTTC 
CGCTCGTCCA CGCCCCCCGC GGCGTGGTTC GTGTGGGGCG CGGCAGCGTT CGCGTTCGCC
ATCGCGGTGT TCCACCGCAG CTCCCTGGGC GTCGCGGCGG TCCCGGCCGC CGAGCGCTTC
GAGGTCGGGG CCAGCGTGGT CGCCACCTTC GTGGTGGTGC AGCTGCTGGT CTACTCCCTC
GCCCAGATCC CCGTCGGCAT CGCCCTGGAC CGCTACGGTT CGCGGCTGCT CATCACCCTG
GGCGCCTTGC TGATGATGGT GGGCCAGGCG TCCATGGCCC TCGCGCCCGA CCTCGGCTGG
GCCATCGCCG CCCGGGTGCT CGTGGGCGCC GGCGACGCGA TGACCTTCGC CTCGGCGATC
CGTCTGGTGC CGGCCTGGTT CGCCCCCTCC CGCATCCCGC TGATGACGCA GATCACCGGT
CTGACGGGGC AGTTCGGGCA GATCCTCTCG GCCGTGCCGC TGGTGGCCCT GCTGGCGAAC
GCGGGCTGGC GCCCGGCCTT CCTCGCCGCC GCGGCCACGA GTGCCGTGGC CTGCGTGGTG
GCGGTGACGC TCATCCGCGA CCGGCCCCCG GGGGACGAGC CGCGACGCAA TCCCACCCGC
CGGCCGCGCA CCAGCATCGC GTCGGTGCTG CGGCACCCCG GCACCTGGCT GGGCGCCAGT
ACGCACGCCG CCACCGTCTT CGGTCCCATG GTGTTCGCGA TGATGTGGGG CTTCCCCTAC
CTCACGGAGG GCGAGGGCCG CAGCGCCGCC TTCGCGTCCT CGATGCTGAC GCTCAGCGTC
GTCCTGGGGC TCGTCTTCGG CCCGATGGTG GGCTTCCTCA CCCAGCGCCA CCCCCTGCGC
CGCTCCACGC TGGTGATCCT GGTGATCCTG GCCAATGCGC TGCCGTTCAC CCTGATGGTG
GCGTGGCCCG GCCCGGCGCC AGCGTGGCTG CTGGTCCTGT GGGTGGTGGG CCTCTCGAGC
GGCGGTCCGG GCTCGGCGGT GGCCTTCGAC TTCGCCCGCA CCTTCTCCCC CTCCGAGCGG
CTGGGCAGCG CCACCGGCAT CATCATCATG ACCGGCTTCG GCGTCACCCT GGTGACCATC
CTCGGCATCG GTGTGGTGCT GGACCTCCAG GGGGGGCGCC TACGACCTGC GCACCTTCCG
CACCGCGCTG GCCGTGCAGT TCGTGCCGTA CGCCCTGGGC ATCGGGGCCA TCCTGTGGTT
CCGGACTCTG GCCCGGCGGC GGATGCGCGT GGAGGAGAAC CTGTACGTCC CCACCTGGCG
CGAGGTCTGG CGCCGGGAGT TCGGCAACCG CAACTGGCCC CGGATCACGA AGGACTGACA
TGA
 
Protein sequence
MSREQNSPAA TGRTPSAAPF RSSTPPAAWF VWGAAAFAFA IAVFHRSSLG VAAVPAAERF 
EVGASVVATF VVVQLLVYSL AQIPVGIALD RYGSRLLITL GALLMMVGQA SMALAPDLGW
AIAARVLVGA GDAMTFASAI RLVPAWFAPS RIPLMTQITG LTGQFGQILS AVPLVALLAN
AGWRPAFLAA AATSAVACVV AVTLIRDRPP GDEPRRNPTR RPRTSIASVL RHPGTWLGAS
THAATVFGPM VFAMMWGFPY LTEGEGRSAA FASSMLTLSV VLGLVFGPMV GFLTQRHPLR
RSTLVILVIL ANALPFTLMV AWPGPAPAWL LVLWVVGLSS GGPGSAVAFD FARTFSPSER
LGSATGIIIM TGFGVTLVTI LGIGVVLDLQ GGRLRPAHLP HRAGRAVRAV RPGHRGHPVV
PDSGPAADAR GGEPVRPHLA RGLAPGVRQP QLAPDHEGLT