| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_21430 |
|---|
| Symbol | |
|---|
| ID | 8373647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 2213125 |
|---|
| End bp | 2214522 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644992390 |
|---|
| Product | isochorismate synthase family protein |
|---|
| Protein accession | YP_003149896 |
|---|
| Protein GI | 256825936 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1169] Isochorismate synthase |
|---|
| TIGRFAM ID | [TIGR00543] isochorismate synthases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.0130324 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00000737773 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG CCGACCAGCC CCGTGACCCC GCCACCCCCG CGACCGGGCG AGCCCCCACC
TCCGCGCGGA TCCCCCGACT CGTGGTGCGC ACCGAGGTCC ACCCCTCCGA TGGGGTGAGC
CTCGGCAAGG TGCTCCCCCG GGTGGCCCCG CAGGAGGTCA CCGCGTGGAT CCGCCGCCGT
GAGGGCATGG TCGGCTGGGG GCGGGCGGCC TCGGTGACGC TGGTCGGTGA GGAGTCGGGG
CCCGACCGGT GGGAGCGCCT GAGCCAGTGG TGGCGGCAGG TGGCGCAGGA GGCGCGTGAG
GAGGTCGTGG CCGACTCGTC GGTGCCCCAG GGGGGCGACG GGTCGCTGCC CCGAGGCGCT
GGGCTGGTGG CGTGGGCGTC CATGGCCTTC AGCGACGACT CCCCGGAGGG TTCGGTGCTC
GTGGTGCCCG AGGTGGTCGT GGGGGTGAAG GACGACGTGG CCTGGGTGAC GCGCATCGAG
GTCGCCGGGG AGGCGACCGA GGGTGCGGCT GCCGAGGGTG CGACGCCGGC CGGCATCCCG
CAGCGCTCGG ACGACCCGCC CTCGGCGCCC ACCCGCATCG AGGAGGGGCC GGGCGGGACC
CCGGCGGAGG GCTGGCCGGC GGTGGTGCAA CGCGGGATCG ACGCGATCCG CTCCGGGCGA
GCCGACAAGG TGGTGCTGGC CCGGGACGTC GTGGCCACGG CCCCCGAGCC GCTGGACGTG
CGCTGGCTCC TCCACCGGCT GGTCGGTGCC TACCCGGACA CGTGGACCTT CGCCGTCGAC
GGACTGGTGG GTGCCACGCC CGAGATGCTC GTGCGCCTGG ACGACGGGCA CGTGTTCTCG
CGGGTGCTGG CCGGGACCGC GTCGCGGGCT GCCGATGTGG AGGACGACCA GCACGCTGCC
GACGACCTGC TCGCGAGCCG CAAGGACCTC TCCGAACACG CCTTTGCCGT GGAGTCGGTG
GTCGAGCGTC TGTCGCCGCT GTGCACTGCG GTGGTGGCGC CCCGGTCGCC GGCCCTGCTC
ACGTTGCCCA ACGTCTTCCA CCTGGTCAGT GACCTGGACG GACGGGCGGT GCCCGGTACG
ACGGTGTTGG AGCTCGCGGG GGCGCTGCAC CCGAGCGCTG CGGTCGGTGG GACGCCCCGC
GTGGTGGCGC TGGACCTCAT CCGGGAGCTC GAGGGACGTG ACCGGGGCCG CTACGCCGGG
CCCGTGGGCT GGATGGATGC GCGTGGCGAC GGCGACATGG GCATCGCGCT GCGCACCGGC
CAGATCGAGG CCGAGGACCC GTGCAGCCTG CGGATGTGGG CCGGTGGCGG CATCATGGCC
GACTCCGACC CGCAGGCCGA GTACGCCGAG ACCGGGGCCA AGCTGGCACC CATGCGTTCG
GCCCTCAGCG GCGACTGA
|
|---|
| Protein sequence | MTAADQPRDP ATPATGRAPT SARIPRLVVR TEVHPSDGVS LGKVLPRVAP QEVTAWIRRR
EGMVGWGRAA SVTLVGEESG PDRWERLSQW WRQVAQEARE EVVADSSVPQ GGDGSLPRGA
GLVAWASMAF SDDSPEGSVL VVPEVVVGVK DDVAWVTRIE VAGEATEGAA AEGATPAGIP
QRSDDPPSAP TRIEEGPGGT PAEGWPAVVQ RGIDAIRSGR ADKVVLARDV VATAPEPLDV
RWLLHRLVGA YPDTWTFAVD GLVGATPEML VRLDDGHVFS RVLAGTASRA ADVEDDQHAA
DDLLASRKDL SEHAFAVESV VERLSPLCTA VVAPRSPALL TLPNVFHLVS DLDGRAVPGT
TVLELAGALH PSAAVGGTPR VVALDLIREL EGRDRGRYAG PVGWMDARGD GDMGIALRTG
QIEAEDPCSL RMWAGGGIMA DSDPQAEYAE TGAKLAPMRS ALSGD
|
|---|
| |