Gene Ksed_21300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21300 
Symbol 
ID8373634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2197449 
End bp2198819 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content73% 
IMG OID644992377 
ProductZn-dependent hydrolase, glyoxylase 
Protein accessionYP_003149884 
Protein GI256825924 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.617308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0075618 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGATCG AGATCATCGA GACCCCGTCC CTGGGCGACC GCAGCTACCT GGTCCACGAC 
GACCGGGAGG CCCTGGTCGT CGACCCGCAG CGCGACATCG ACCGCGTGCT GGAGGCGGCC
GAGCGTGCCG GGGTGACGAT CACCGCCGTC GCCGAGACCC ACATCCACAA CGACTACGTC
ACCGGCGGGC ACGCGCTGGC CCAGCAGGTC GGTGCCACCT ACTACGTCAA CGCCGAGGAC
GAGGTGTCCT TCGAGCGCCA CGGCATCCGT GACGGCGAGG AGTTCGCCGT GGGCAGCCTC
ACCGTGCGCG CCCTGTCCAC CCCGGGCCAC ACCTTCACCC ACCTGTCCTA CGTCGTGACC
CCCGCCGACG GGTCCGAGCC GGCCGTGTTC ACCGGCGGCT CCCTGCTCTT CGGCTCCACC
GGCCGCCCGG ACCTGCTGGG CCCCGACCAC ACCGAGGCGC TCGCCCACCA CCAGTACGAC
TCCGCCCACC GGCTGGCCCG GGAGCTGCCG GACGAGACGC GCATCATGCC CACCCACGGC
TTCGGCAGCT TCTGCTCGGC CACGCAGACC GCCGGCGACA GCTCCACCAT CGGGGCCGAG
CGCCAGCAGA ACCCGGTGAT GCACCAGGAG CGCGACCAGT GGCTCGCCGA GCTGTACGAG
GGCCTGGCCG CCTACCCGGC CTACTATCGG CACATGGCCC CCGCCAACGC CTCCGGTCCC
TCGGCCGCCG TGCTGGAGCG CCCGGCCGTC GCGGACCGGG AGGTCATCGC CGACGCACTG
GCCGCCGGGC ACTGGGTGGT GGACCTCCGC AGCCGCCGGG CCTTCGCCGA GGGGCATGTC
GAGGGCACCA TCAGCATCGA CCTGGAGGGC CAGTTCGCCA CCTACCTCGG CTGGCTGATC
CCGTGGGAGA CCCCGCTGGT GCTCCTCGGC CAGGACGCCG ACCAGGTGGA CGAGGCGGTG
CGCGAGCTCT CCCGCATCGG CATCGAGGAG ACCCTCGCCG GTCACGCCAC GGGCTCGCCG
TCCGACTGGA CCGACCGGGC CGTCCAGAGC TTCCCGCAGG CGACCTTCGC CCAGCTGCGC
GACGTCCGGC ACCACCGGGA GGTGACGATC GTCGACGTCC GCCAGCGCGC GGAGTGGGAG
GACGGCCACC TCGAGGGCGC GGTGAACCTG CCGCTGACCC AGATGGGCGA CCTGCGCCAG
GGCGAGCTCG TCGCGGGGCT CGACCCGCGG GCCGAGCTGT GGGTGCACTG CGCCGGCGGC
TTCCGCGCCT CGGTGGCGGC CTCCCTCCTG GCCCGCGCCG GTCACCGGGT CGTCGCCATC
GACGACGGCT TCGACAACGC GGCCAACAGC GGTCTGGCCA TTACCCCGTG A
 
Protein sequence
MQIEIIETPS LGDRSYLVHD DREALVVDPQ RDIDRVLEAA ERAGVTITAV AETHIHNDYV 
TGGHALAQQV GATYYVNAED EVSFERHGIR DGEEFAVGSL TVRALSTPGH TFTHLSYVVT
PADGSEPAVF TGGSLLFGST GRPDLLGPDH TEALAHHQYD SAHRLARELP DETRIMPTHG
FGSFCSATQT AGDSSTIGAE RQQNPVMHQE RDQWLAELYE GLAAYPAYYR HMAPANASGP
SAAVLERPAV ADREVIADAL AAGHWVVDLR SRRAFAEGHV EGTISIDLEG QFATYLGWLI
PWETPLVLLG QDADQVDEAV RELSRIGIEE TLAGHATGSP SDWTDRAVQS FPQATFAQLR
DVRHHREVTI VDVRQRAEWE DGHLEGAVNL PLTQMGDLRQ GELVAGLDPR AELWVHCAGG
FRASVAASLL ARAGHRVVAI DDGFDNAANS GLAITP