Gene Ksed_21080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21080 
Symbol 
ID8373612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2178968 
End bp2180329 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content68% 
IMG OID644992356 
Producttransposase, IS30 family 
Protein accessionYP_003149865 
Protein GI256825905 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.656818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCCCGC CGATGCGTTC GCCGGGCCGG CCTGAGCCCT CGCGTGCGGT CCAGCGTCAG 
TTCTGGCGAT TGATCGCCAC GGGTATCACC TCGGCCGAGG CTGCGGTGAG GGTGGGCGTG
TCCGTGCCGG TCGGTTCTCG CTGGTTTCGT CACGCTGGCG GCATGCCACC GATCTCGCTG
GTTGAACCCA CCGGCCGCTA CCTGTCTTTC GAGGAACGCG AGGAGATCGC GATCCTGCGC
GCCCGAGGTC AGGGCGTGCG CGAGATCGCG CGCGCGATCG GCCGTGACCC TGGGGCGATC
TCGCGTGAGC TGCGCCGCAA CGCCGCGACC AGGAGCGGGA AGCAGGAGTA CCGGGCGGTG
GTGGCGCAGT GGAAGGCTCA GCAGGCTGCG AAGCGTCCCA AGACCGCGAA GCTCGTCAAG
AACGACCGGT TGCGGGAGTA CGTCCAAGAG CGGCTCGCTG GCAGCATCCG TCGACCTGAC
GGCACGTTCG TCGATGGTCC GACACCACCG GCATGGAAGG GCTTGAACAA GGCCCGCCGG
GCGGATCGTC GCTGGTCGAG GGCATGGAGC CCGGAGCAGA TCAGCCAGCG TCTGAAGGTC
GACTTCCCCG ATGATGAGTC CATGCGCATC AGCCACGAGG CGATCTACCA GTCGCTGTTC
ATCCAGGGCC GCGGCGCGCT CCAGCGCGAA CTGGTCGCCT GCCTGCGCAC CGGCCGGGCT
CTGCGTCGTC CGCGGGAGCG GTCCCGGAAC AAGGCGCAGG GGCATGTCAC CGCTGATGTG
GTCCTGTCCG AGCGTCCGGC CGAGGCCGAT GACCGGGCGG TGCACGGACA TTGGGAGGGC
GATCTGATCA TCGGAACCGG TAGGTCGGCG ATCGGCACCC TCGTCGAACG CAGCAGCCGC
GCCACCCTGC TGGTGCACCT GCCGCGCATG GAAGGCCATG GCGAGACGCC GTACGTGAAG
AACGGGCCAG CGCTGGGTGG CTACGGTGCC GTGGCGATGA ACGCCGCGCT GACCGCGTCG
ATGACCACGC TGCCCGAGCA GCTGCGCAAG ACCATCACCT GGGACCGCGG CAAGGAACTG
TCCGGCCACG CGACGTTCGC GCTGGAGACC GGCACCAAGG TGTTCTTCGC CGACCCGCAC
TCGCCCTGGC AGCGGCCGAC CAACGAGAAC ACCAACGGGC TGCTGCGGCA GTACTTCCCC
AAAGGCACGG ACCTGTCGCG CTGGTCGGCC GAAGACCTCG AGGCCGTCGC GTACACCCTC
AACAACCGCC CCCGCAAGGT CCTCGGGTGG AAGACCCCCG CCGAGGTCTT CGACGAGCAA
CTACGCTCCC TTCAACAACC CGGTGTTGCA TCGACAGGTT GA
 
Protein sequence
MRPPMRSPGR PEPSRAVQRQ FWRLIATGIT SAEAAVRVGV SVPVGSRWFR HAGGMPPISL 
VEPTGRYLSF EEREEIAILR ARGQGVREIA RAIGRDPGAI SRELRRNAAT RSGKQEYRAV
VAQWKAQQAA KRPKTAKLVK NDRLREYVQE RLAGSIRRPD GTFVDGPTPP AWKGLNKARR
ADRRWSRAWS PEQISQRLKV DFPDDESMRI SHEAIYQSLF IQGRGALQRE LVACLRTGRA
LRRPRERSRN KAQGHVTADV VLSERPAEAD DRAVHGHWEG DLIIGTGRSA IGTLVERSSR
ATLLVHLPRM EGHGETPYVK NGPALGGYGA VAMNAALTAS MTTLPEQLRK TITWDRGKEL
SGHATFALET GTKVFFADPH SPWQRPTNEN TNGLLRQYFP KGTDLSRWSA EDLEAVAYTL
NNRPRKVLGW KTPAEVFDEQ LRSLQQPGVA STG