Gene Ksed_20860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20860 
Symbol 
ID8373590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2152326 
End bp2152997 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content70% 
IMG OID644992335 
ProductLSU ribosomal protein L4P 
Protein accessionYP_003149845 
Protein GI256825885 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.699759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACGA TCGACATCAT CAGCCCCGCT GGCAAGGCCA CCGGTTCGGT TGAGCTGCCC 
GCCGAGATCT TCGACGTGGC TGCCAACGTG CCGCTGATCC ACCAGGTCGT CGTGGCCCAG
CTGGCCGCTG CACGCCAGGG CACGCACTCC ACCAAGACCC GCGCCGAGGT GCGGGGCGGT
GGCCGCAAGC CCTACCGCCA GAAGGGCACT GGTCGCGCCC GCCAGGGTTC GACGCGCGCA
CCGCAGTTCG CAGGCGGTGG CATCGTCCAC GGCCCGCAGC CCCGCGACTA CGCCCAGCGG
ACCCCCAAGA AGATGAAGGC CGCCGCGCTG CGTGGCGCGC TGTCCGACCG TGCCCGTCAC
GGCCGCATCC ACGTGCTGAG CGCCGTCCTC GAGGGCGACG CGCCCTCGAG CAAGGCGGTC
AACGCCCTGC TGCGTGGTCA GACCGAGCGT CGCAACCTGC TGGTCGTGCT GGAGCGTGGT
GACGAGCTGT CGCTGATGAG CCTGCGCAAC CTGCAGAACG TGCACGCCCT GTTCGCCGAC
CAGCTGAACA CCTACGACGT CATGTGCGCC GATGACGTGT TCTTCACGGC CGGTGCGCTG
GACGCCTTCA TCGCCGGTGG CCAGAAGGCC GCTGCCGACA CGAACGCTGC GACGCAGGAG
GTTGCCCAGT GA
 
Protein sequence
MPTIDIISPA GKATGSVELP AEIFDVAANV PLIHQVVVAQ LAAARQGTHS TKTRAEVRGG 
GRKPYRQKGT GRARQGSTRA PQFAGGGIVH GPQPRDYAQR TPKKMKAAAL RGALSDRARH
GRIHVLSAVL EGDAPSSKAV NALLRGQTER RNLLVVLERG DELSLMSLRN LQNVHALFAD
QLNTYDVMCA DDVFFTAGAL DAFIAGGQKA AADTNAATQE VAQ