Gene Ksed_20720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20720 
Symbol 
ID8373576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2145843 
End bp2146382 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content66% 
IMG OID644992321 
ProductLSU ribosomal protein L6P 
Protein accessionYP_003149831 
Protein GI256825871 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGTA TTGGACGTCT TCCCGTCACT GTGCCCAGTG GTGTCGACGT GACCATCGAT 
GGCCAGGACG TGAAGGTCAA GGGCCCCAAG GGTGAGCTCT CCGTCACGAT CCCCGGACCG
ATCACGGCCG CGAAGAACGA CGAGGGTGCC GTGGAGCTGT CCCGCCCGGA CGACGAGCGC
GACTCCCGCG CCCGTCACGG TCTGAGCCGC AGTCTGGTGC AGAACATGGT GGTCGGTGTG
ACCGAGGGGT ACTCCAAGAC CCTCGAGATC AACGGCACCG GTTACCGCGT GGTGGCCAAG
GGCTCGGACC TCGAGTTCGC CCTGGGCTAC TCGCACCCGA TCCTGGTGAA GGCCCCCGAG
GGCATCACCT TCGCCGTCGA GAGCCCGACC CGGTTCTCCG TGAGCGGCAT CGACAAGCAG
CTCGTGGGCG AGGTCGCGGC CAACATCCGC AAGCTGCGCA AGCCCGACCC GTACAAGGCC
AAGGGTGTGC GCTACGAAGG CGAGCACATC CGCCGCAAGG TCGGAAAGGC TGGTAAGTAA
 
Protein sequence
MSRIGRLPVT VPSGVDVTID GQDVKVKGPK GELSVTIPGP ITAAKNDEGA VELSRPDDER 
DSRARHGLSR SLVQNMVVGV TEGYSKTLEI NGTGYRVVAK GSDLEFALGY SHPILVKAPE
GITFAVESPT RFSVSGIDKQ LVGEVAANIR KLRKPDPYKA KGVRYEGEHI RRKVGKAGK