| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_20670 |
|---|
| Symbol | |
|---|
| ID | 8373571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 2142537 |
|---|
| End bp | 2143856 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644992316 |
|---|
| Product | protein translocase subunit secY/sec61 alpha |
|---|
| Protein accession | YP_003149826 |
|---|
| Protein GI | 256825866 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCAGCT CATTCGGTCG GGCGTTCCTG ACTCCCGACC TGCGTGGCAA GTTGCTGTTC
ACGCTCGCGA TCATGGCGCT CTTCCGCCTC GGGTCGCACG TGCCCACACC CGGCATCGAC
TACAGCCTCG TGCAGACCTG CCAGGCCAAC GGCGCGGGGA CGAACTCCCT GCTGGGCCTG
ACGAACATGT TCTCCGGGGG AGCGCTGCTC CAGCTGTCGA TCTTCGCGCT GGGGATCATG
CCCTACATCA CCGCGAGCAT CATCGTGCAG CTGCTCACCG TGGTGATCCC GCACTTCGAG
CGCCTCAAGC AGGAGGGCTC CGCGGGCCAG GCGAAGATGA CGCAGTACAC GCGCTACCTG
ACCATCGGTC TGGCCGTGCT GCAGTCGACC ACGCTCATCA GCTTCGCGCG CAACCCCCAC
CAGCTCTTCG GTGGCACCCC TGCCCAGTGC CCGACGGTCA TGACCAGCGA GTCGCTGGGC
ACCGTGGCCC TGATGGTGCT GACCCTCACC GCCGGCACCG GCCTGGTGAT GTGGCTCGGT
GAGACCATCA CCGAGAAGGG CATCGGCAAC GGCATGTCGC TGCTGATCTT CACGGCCATC
GCCGCCGGCT TCCCCGGCTC GTTGTGGGCC ATCAAGGACC GTGGCTGGGA CAAGTTCGCG
ATGGTGCTGC TGCTCGGCCT GGTGATCCTC ACCATCGTCG TGTTCGTGGA GCAGTGCCAG
CGCCGGGTCC CGGTGCAGTA CGCAAAGCGC ATGGTCGGTC GCCGCATGTA CGGCGGCACC
TCGACCTACA TCCCGCTCAA GCTCAACATG GCGAACGTGA TCCCGATCAT CTTCGCCAGT
TCCATCCTGA TGCTGCCGAT GATGGTGGCG CAGTTCCAGA CGCCCAACGA CGGCTCGCGT
CCGCCGGCCT GGGTGGAGTG GGTCTCGCGG CACCTGCAGA TGAGCACCGA CCCGGTCTAC
GTGATCGTGT ACTTCGCGCT CATCGTCTTC TTCGCCTTCT TCTACACGTC GATCACCTTC
GACCCGGACG ACGTCGCGGA CTCCATGAAA CGCTATGGCG GTTTCGTGCC GGGCGTGCGT
GCCGGCCGCC CGACGGCCCA GTACCTGCGC TACGTCCTGA ACCGCATCAC GGCCCCCGGT
GCCCTGTACC TGGGCATCCT GGCCCTGATC CCGCTCTACG CGTTCGACCG CCTCGGCGCG
ATCGGTGACT TCCCCTTCGG CGGTGCCTCG CTGCTCATCG TCGTGGGTGT CGGACTGCAG
ACCGTGAAGC AGATCGAGTC CAAGTTGCAG CAGCACGAGT ACGAAGGATT CCTCCGATGA
|
|---|
| Protein sequence | MLSSFGRAFL TPDLRGKLLF TLAIMALFRL GSHVPTPGID YSLVQTCQAN GAGTNSLLGL
TNMFSGGALL QLSIFALGIM PYITASIIVQ LLTVVIPHFE RLKQEGSAGQ AKMTQYTRYL
TIGLAVLQST TLISFARNPH QLFGGTPAQC PTVMTSESLG TVALMVLTLT AGTGLVMWLG
ETITEKGIGN GMSLLIFTAI AAGFPGSLWA IKDRGWDKFA MVLLLGLVIL TIVVFVEQCQ
RRVPVQYAKR MVGRRMYGGT STYIPLKLNM ANVIPIIFAS SILMLPMMVA QFQTPNDGSR
PPAWVEWVSR HLQMSTDPVY VIVYFALIVF FAFFYTSITF DPDDVADSMK RYGGFVPGVR
AGRPTAQYLR YVLNRITAPG ALYLGILALI PLYAFDRLGA IGDFPFGGAS LLIVVGVGLQ
TVKQIESKLQ QHEYEGFLR
|
|---|
| |