Gene Ksed_20570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20570 
Symbol 
ID8373561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2134185 
End bp2136716 
Gene Length2532 bp 
Protein Length843 aa 
Translation table11 
GC content71% 
IMG OID644992306 
Producttrehalose/maltose hydrolase or phosphorylase 
Protein accessionYP_003149816 
Protein GI256825856 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1554] Trehalose and maltose hydrolases (possible phosphorylases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.414924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCG CGAACCACGT CACCGCCCAC GCCGACGGCG CACCCCGCAC CGACCCGATG 
GACCGCACGC GCTTCCCCAT CGACCCCTGG CGGCTCGTGG AGACCGCTTG CCGCAGCGAG
GACCTCGGCC ACACCGAGAC CCTCTTCGCC GTGGCCAACG GCTACCTGGG CCTGCGGGGC
AACCCCGAGG AGGGCCGCGA GGCCCACACC CACGGCACCT TCGTCAACGG CGTCCACGAG
ACCTGGCGCA TCAAGCACGC CGAGGAGGCC TATGGCTTCG CCAAGGTGGG CCAGACGATC
GTCAACGCCC CCGACGCCAA GCTGATGAAG CTGTACGTGG ACGACGAGCC CTTCATCCTG
GCCACGGCGG ACATCGAGTC CTACGAGCGC TCCCTGGACA TGCGGGCGGG CACCCTCACC
CGCGACGTCG TGTGGCGCAC TCCCGCGGGC AAGCGGGTGC GCGTGCACTC CGAGCGCCTC
GTCTCGTTCG CGGAACGGCA CCTCGCGCTG CTCTCCCTGG AGGTCCAGAT GCTGAGTGGT
GACGCGGCGC TGACCGTGTC GAGCCAGATC CTCAACCGCC AGGACGGCAG CGACGAGTAC
GCCGTCGACT CCAAGTCCCT GGGCGCCGGT TTCGACCCGC GCAAGGCCGC CACCTTCGGG
CACCGCGTGC TGCAGTCGCA GGCCCAGGAG ACCACCGACC GGCGCCTGGC GATGGGGTGG
CGCACCACCA ACTCGCGCAT GACGCTCGGC GTGGGCGTGG AGCACCAGGT GACGACCGAT
GCGGAGGTGC GCCCCAGCCA GGTGGTCACC GAGGACCAGG CCAAGCAGGT CTACGCCTTC
CGCCTGCAGG AGGGGCAGAG CTTCCGCCTG GACAAGTGGG TCAGCTACCA CTCCTCCACC
GGGGTGCCGG TGCCGGAGCT GCTCGACCGC TGCCACCGCA CCCTGGACCG ACTGGCCTCC
GAGGGCGTCG CCGCCGCGCA CGCCGCCCAG GCCGACTGGC TCGCGGACTT CTGGGCCAAC
GCCGACGTGG AGGTGCCCGC CGACCCGGCC ATCCAGCAGG CCGTGCGCTA CGCCTTGTTC
TCGCTGGCGC AGGCCACCGG CCGCGCGGAC CGCGAGGGCA TCCCGGCCAA GGGCGTCACG
GGCAGCGGCT ACGAGGGCCA CTACTTCTGG GACACCGAGG CCTACGTGGT GCCGTTCCTG
ACCTACACGA TGCCGCACCT GGCCCGCAAC GCCCTCCACT TCCGCTCGCG GTTGCTGCCC
AAGGCCCGGG AGCGCGCCGC CGACCTCGCC CTGGAGGGCG CGCTGTTCCC CTGGCGCACC
ATCAACGGCG AGGAGGCCAG CGCCTACTAC GCGGCCGGCA CCGCCCAGTA CCACATCGAC
GCCGACGTGG CCTACGCCCT GACCAAGTAC CTCGACGCCA CCGGTGACGA GCACCTCGCC
CGGCGCGACG CCGTCGACAT CCTCGTGGGC ACCGCACGGA TGTGGGCCGA CCTCGGGTTC
TGGCGGCACG GCGACGAGCC GAGCTTCCAC ATCCACAGCG TCACCGGACC GGACGAGTAC
ACCGCGGTGG TGAACAACAA CCTCTTCACC AACGTCATGG CCCGGTACAA CCTGGAGCGC
GCCGCCAGCG CCCTCGCCCG GCTCGCGGAG GAGGACCCGC AGGCCCACTC CGAGGCCGTC
GAGCGGCTGG ACCTCCGCGA GGACGAGGCA CAGACCTGGG AGCGCCTCGC CGCTGCCGTG
CACATCCCCT ACGACGAGGC CCTCGGCATC CACCCCCAGG ACGAGCACTT CCTGGACCGG
GAGATCTGGG ACCTGGCGGC CACCCCACCG GAGAAGCACC CGCTGCTGCT GCACTACCAC
CCGTTGGTGA TCTACCGCTA CCAGGTGCTC AAGCAGGCCG ACGTGGTGCT GGCACTGTTC
CTGCAGGGCG ACCGGTTCAC CCTCGAGCAG AAGCGGGCGA ACTTCGAGTA CTACGACCCC
ATCACCACCG GGGACTCCAC CCTCTCGGCC GTCGTGCAGT CGATCATGGC CGCCGAGGTC
GGGTACCACC GCATGGCGCT GGACTACTTC CTGCGGGCGC TCTACGTGGA CCTGGCCGAC
GCCCACTCCA ACACCGAGGA CGGCATGCAC ATCGCCAACT CGGGCGGCGT GTGGAGCGCC
CTGGTCTCCG GCTTCGGCGG CATGCGCGCC GTCGCTGGCC AGCTCACCTT CGACCCGCGC
CTCCCCGAGG ACTGGGACGA GATCACCTTC CGGGTGCAGT GGCGGGGCAG CCGGTTGCGC
ATCCGCGTGG CGCAGGAGTC CATGGAGCTC ACCGCCGAGA CCGGCCCGGC CAGCGGCGCG
GAGCCGGTCA CCCTCATCGT GCGGGGTGAG CCGGTGTCCG TCGGCCCGGA GACCACCACG
GTCGCCCTGG ACGGACAGGG AGAGCGTCTC GATGCGGTGC TCTCGCCCGG GTGCCAGGTC
GGCCGGGCCC GCGCCGACGG GACCGTCATC ACGGCCAGCA CCCCCGAGGA GGGCGCCGCG
ACCACCACCT GA
 
Protein sequence
MTAANHVTAH ADGAPRTDPM DRTRFPIDPW RLVETACRSE DLGHTETLFA VANGYLGLRG 
NPEEGREAHT HGTFVNGVHE TWRIKHAEEA YGFAKVGQTI VNAPDAKLMK LYVDDEPFIL
ATADIESYER SLDMRAGTLT RDVVWRTPAG KRVRVHSERL VSFAERHLAL LSLEVQMLSG
DAALTVSSQI LNRQDGSDEY AVDSKSLGAG FDPRKAATFG HRVLQSQAQE TTDRRLAMGW
RTTNSRMTLG VGVEHQVTTD AEVRPSQVVT EDQAKQVYAF RLQEGQSFRL DKWVSYHSST
GVPVPELLDR CHRTLDRLAS EGVAAAHAAQ ADWLADFWAN ADVEVPADPA IQQAVRYALF
SLAQATGRAD REGIPAKGVT GSGYEGHYFW DTEAYVVPFL TYTMPHLARN ALHFRSRLLP
KARERAADLA LEGALFPWRT INGEEASAYY AAGTAQYHID ADVAYALTKY LDATGDEHLA
RRDAVDILVG TARMWADLGF WRHGDEPSFH IHSVTGPDEY TAVVNNNLFT NVMARYNLER
AASALARLAE EDPQAHSEAV ERLDLREDEA QTWERLAAAV HIPYDEALGI HPQDEHFLDR
EIWDLAATPP EKHPLLLHYH PLVIYRYQVL KQADVVLALF LQGDRFTLEQ KRANFEYYDP
ITTGDSTLSA VVQSIMAAEV GYHRMALDYF LRALYVDLAD AHSNTEDGMH IANSGGVWSA
LVSGFGGMRA VAGQLTFDPR LPEDWDEITF RVQWRGSRLR IRVAQESMEL TAETGPASGA
EPVTLIVRGE PVSVGPETTT VALDGQGERL DAVLSPGCQV GRARADGTVI TASTPEEGAA
TTT