Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_20400 |
Symbol | ispH |
ID | 8373544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 2117894 |
End bp | 2118913 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644992289 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_003149799 |
Protein GI | 256825839 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.0307247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.284401 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATACCC AGACGACCCA AGAGACCAAG CGCGTCCTGC TGGCCGCCCC CCGCGGCTAC TGCGCCGGCG TCGACCGGGC CGTCGTCACG GTCGAGAAGG CCCTCGAGCT GTACGGCGCA CCGGTCTACG TCCGCAAGGA GATCGTGCAT AACAAGCACG TGGTGGACAC CCTGCGCCGC CGGGGTGCGG TGTTCGTGGA GGAGACCGAC GAAGTGCCCG AGGGCGCCAC GGTCATCTTC TCCGCCCACG GCGTGGCCCC GATCGTGCAC GAGGAGGCCA AGGCTCGCAG CCTGAAGTCC ATCGACGCGA CCTGCCCGCT GGTCACCAAG GTGCACCGCG AGGCCGTGCG CTTCGCCGAC GACGACTACG ACATCCTGCT GATCGGCCAC GAGGGGCACG AGGAAGTCGT CGGCACCGCC GGTGAGGCTC CCGAGCACGT GATCCTCGTG GACGGCCCCG AGGGTGTGAA GGACGTGGAG GTGCGCGACC CGGAGAAGGT CGTGTGGCTC TCGCAGACCA CCCTGAGCGT GGACGAGACG ATGGAGACCG TGCGTCTGCT GCGCGAGAAG TTCCCCTCCC TGCAGGACCC GCCGAGCGAC GACATCTGCT ACGCCACGCA GAACCGCCAG CTGGCCGTGA AGCAGATGGC CCCCGAGCTG GACCTGATGC TCGTGGTGGG CTCGCGCAAC TCCTCGAACT CGGTCCGCCT CGTGGAGGTG GCGCTGGAGC ACGGGGCACG GGACGGGTAC CTGGTCGACT ACGCCGCCGA GCTGCAGGAC GAGTGGTTCG AGGGCGTGGA GACCGTCGGT GTCTCCTCGG GTGCCTCGGT GCCGGAGATC CTGGTGCGTG ATGTGCTGGA CGACCTCGCC GCCCGCGGCT ACCTCGACGT GGACGTGTTC ACCGCGGCCG AGGAGAAGAT GCTCTTCCAG CTGCCCGGTG AGCTGCGCCG CGACCTGCGC GCCTCGGGGA TGGACGACAC CTCCACCGAG ATCCGGCACG ATGCGGGGGC TCTTCCATGA
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Protein sequence | MDTQTTQETK RVLLAAPRGY CAGVDRAVVT VEKALELYGA PVYVRKEIVH NKHVVDTLRR RGAVFVEETD EVPEGATVIF SAHGVAPIVH EEAKARSLKS IDATCPLVTK VHREAVRFAD DDYDILLIGH EGHEEVVGTA GEAPEHVILV DGPEGVKDVE VRDPEKVVWL SQTTLSVDET METVRLLREK FPSLQDPPSD DICYATQNRQ LAVKQMAPEL DLMLVVGSRN SSNSVRLVEV ALEHGARDGY LVDYAAELQD EWFEGVETVG VSSGASVPEI LVRDVLDDLA ARGYLDVDVF TAAEEKMLFQ LPGELRRDLR ASGMDDTSTE IRHDAGALP
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