Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_19860 |
Symbol | |
ID | 8373490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 2070987 |
End bp | 2071913 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644992238 |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_003149748 |
Protein GI | 256825788 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1230] Co/Zn/Cd efflux system component |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.163356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00158825 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGGTGCCG GCCACGACCA CGCGCACGCC ACGGCGAGCA CGGCCCGCTC GCGGCTGGCG GTCGCCTTCG CCCTGACCTC CTTGGTCGCG GTCTCCCAGG CCGTGGGCAG CGTCGTCACC GGCAGCCTGG CCCTGCTCAC CGACACCGCC CACGCCCTGG TCGACGCCTC GGGACTCCTG GTGGCCCTCG TGGCGGCCAC GATGATGACC CGGCCGGCCA GCAGCGCCCG CACCTGGGGC TTCGCCCGGC TGGAGGTGCT CGCAGCCCTG GCCCAGGCCA CCCTGCTCGT CGTCGTCGGG ATCTACACCG CCGTCGAGGG CGTCCGGCGG CTCTCGGCTC CCCCGGAGGT GCCGCCCGGT GAGCTCCTGG TCTTCGGCGT CGTGGGCCTG GTGGTCAACC TCCTGGCCAT GCTGGTCCTC GCCGGTGGGC GCGACGCCAG CCTCAACATG CGCGCCGCCT TCCTGGAGGT GCTCAACGAC GCGCTGGGCT CGGTCGGGGT CATCGTCGCG GCCCTGACGA TCCGCTTCAC CGGCTTCCTG CGGGCCGACG CCCTGGCCGG CCTGTTCATC GCCGCGCTCA TCGTCCCCCG GGCCGTGCGG ATCCTGCGCG TGGCGCTGCG CATCCTCATG GAGTACACCC CGGAGGGGGT CGACCTGGAC GAGGTGCGCC GCCACCTGCT GGAGCGGGAC CACGTCCTGG ACGTCCACGA CCTCCACGCC TCGGCGATCG GCACGAACTT GCCCATCCTC TCGGCCCACG TGGTGGTCGA GGAACGCTGC TTCGAGTCCG CCCACGCGCT GGAGATCCTG CAGGACATGC ACGAGTGCCT GCGCACGGAC TTCCCGGTGG CCTTCGAGCA TGCCACGATC CAGCTGGAGA CCCCGGCCAT CCACGCGCAG GAGCCGACAC ACAGCCTGCA CGACTGA
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Protein sequence | MGAGHDHAHA TASTARSRLA VAFALTSLVA VSQAVGSVVT GSLALLTDTA HALVDASGLL VALVAATMMT RPASSARTWG FARLEVLAAL AQATLLVVVG IYTAVEGVRR LSAPPEVPPG ELLVFGVVGL VVNLLAMLVL AGGRDASLNM RAAFLEVLND ALGSVGVIVA ALTIRFTGFL RADALAGLFI AALIVPRAVR ILRVALRILM EYTPEGVDLD EVRRHLLERD HVLDVHDLHA SAIGTNLPIL SAHVVVEERC FESAHALEIL QDMHECLRTD FPVAFEHATI QLETPAIHAQ EPTHSLHD
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