Gene Ksed_19860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19860 
Symbol 
ID8373490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2070987 
End bp2071913 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content72% 
IMG OID644992238 
Productcation diffusion facilitator family transporter 
Protein accessionYP_003149748 
Protein GI256825788 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.163356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00158825 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGTGCCG GCCACGACCA CGCGCACGCC ACGGCGAGCA CGGCCCGCTC GCGGCTGGCG 
GTCGCCTTCG CCCTGACCTC CTTGGTCGCG GTCTCCCAGG CCGTGGGCAG CGTCGTCACC
GGCAGCCTGG CCCTGCTCAC CGACACCGCC CACGCCCTGG TCGACGCCTC GGGACTCCTG
GTGGCCCTCG TGGCGGCCAC GATGATGACC CGGCCGGCCA GCAGCGCCCG CACCTGGGGC
TTCGCCCGGC TGGAGGTGCT CGCAGCCCTG GCCCAGGCCA CCCTGCTCGT CGTCGTCGGG
ATCTACACCG CCGTCGAGGG CGTCCGGCGG CTCTCGGCTC CCCCGGAGGT GCCGCCCGGT
GAGCTCCTGG TCTTCGGCGT CGTGGGCCTG GTGGTCAACC TCCTGGCCAT GCTGGTCCTC
GCCGGTGGGC GCGACGCCAG CCTCAACATG CGCGCCGCCT TCCTGGAGGT GCTCAACGAC
GCGCTGGGCT CGGTCGGGGT CATCGTCGCG GCCCTGACGA TCCGCTTCAC CGGCTTCCTG
CGGGCCGACG CCCTGGCCGG CCTGTTCATC GCCGCGCTCA TCGTCCCCCG GGCCGTGCGG
ATCCTGCGCG TGGCGCTGCG CATCCTCATG GAGTACACCC CGGAGGGGGT CGACCTGGAC
GAGGTGCGCC GCCACCTGCT GGAGCGGGAC CACGTCCTGG ACGTCCACGA CCTCCACGCC
TCGGCGATCG GCACGAACTT GCCCATCCTC TCGGCCCACG TGGTGGTCGA GGAACGCTGC
TTCGAGTCCG CCCACGCGCT GGAGATCCTG CAGGACATGC ACGAGTGCCT GCGCACGGAC
TTCCCGGTGG CCTTCGAGCA TGCCACGATC CAGCTGGAGA CCCCGGCCAT CCACGCGCAG
GAGCCGACAC ACAGCCTGCA CGACTGA
 
Protein sequence
MGAGHDHAHA TASTARSRLA VAFALTSLVA VSQAVGSVVT GSLALLTDTA HALVDASGLL 
VALVAATMMT RPASSARTWG FARLEVLAAL AQATLLVVVG IYTAVEGVRR LSAPPEVPPG
ELLVFGVVGL VVNLLAMLVL AGGRDASLNM RAAFLEVLND ALGSVGVIVA ALTIRFTGFL
RADALAGLFI AALIVPRAVR ILRVALRILM EYTPEGVDLD EVRRHLLERD HVLDVHDLHA
SAIGTNLPIL SAHVVVEERC FESAHALEIL QDMHECLRTD FPVAFEHATI QLETPAIHAQ
EPTHSLHD