| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_19610 |
|---|
| Symbol | |
|---|
| ID | 8373466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 2043904 |
|---|
| End bp | 2044824 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644992216 |
|---|
| Product | universal stress protein UspA-like protein |
|---|
| Protein accession | YP_003149726 |
|---|
| Protein GI | 256825766 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 0.697757 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0279477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGACA CCAGCCGAGC ACGGGCCATT CCCGAGAACG TCGTGGTGGT GGGGGTGGAC
GGCACCGAAC GCGACCGCGA GGTCGTGGGC TGGGCAGCGC GCTCGGCACT GCGGCGCGGT
GTGGGGCTCC ACGCCATCCA CGCGCAGGAG ACCATGGCCA CCGCCTACGC GCCGGTCGGG
TTCGGCATGG ACGCGCCCCT GCTCACCCAG CAGGGCGACG AGGTGGACGC CGGCCGGGAG
GTCCACGAGC ACGTGCTGGA CATCCTCGGC GGCTTGGAGG AGGCACCCGA GCTGACCTTC
AGCGCCCCGT GGAACACCGG CAGCCAGGCG CTGCTGGAGG CCCAGGACAA GGCGCAGCTG
ATCGTCGTGG GCACGGCTCG CAAGCACGGC CTGACCCGTT TCCTGCTGGG TTCCACCAGC
CTCACGGTGG CCATGCACGC CACCTGCCCC GTGGTCGTCG TGGGCCCCGA GGTGAGCCGC
GAGACCCGTG GCCTGCTGCT GGTGGGCGTC GACGGCAGCC GCGACAGCTC CAAGGCCCTG
CACTTCGCGA TGGACGCCGC CCACAAGTGG GGCCTGCGCG TGCGGGCGGT CACCACCTGG
CACATGGCCG TCGTGAACGG GTACGTCGTC ACCGAGCCGG ACTCCCAGGA GTGGCGCGGC
ATCGTGGCCG ACCTCGAGGG CTCGGTCCAG GAGGTCGTCG CCGAGGTCAA GGCCGCCACC
CCGGAGCTGG CCGACGTGGA GGTGGAGGTC CAGGCCGTCC ACGGGCGCCC GGTCTCGGCC
CTGGTCGAGG GCTCCAAGGA GGCCGACCTG GTGGTCGTGG GCTCGCGGGG CCGCGGCGGT
GTCGCCGGCG CCCTGCTGGG CTCGGTGAGC CAAGGGGTCC TGGCCGACGC GCACTGCCCG
GTGGCCATCC TCACGCACTG A
|
|---|
| Protein sequence | MGDTSRARAI PENVVVVGVD GTERDREVVG WAARSALRRG VGLHAIHAQE TMATAYAPVG
FGMDAPLLTQ QGDEVDAGRE VHEHVLDILG GLEEAPELTF SAPWNTGSQA LLEAQDKAQL
IVVGTARKHG LTRFLLGSTS LTVAMHATCP VVVVGPEVSR ETRGLLLVGV DGSRDSSKAL
HFAMDAAHKW GLRVRAVTTW HMAVVNGYVV TEPDSQEWRG IVADLEGSVQ EVVAEVKAAT
PELADVEVEV QAVHGRPVSA LVEGSKEADL VVVGSRGRGG VAGALLGSVS QGVLADAHCP
VAILTH
|
|---|
| |