Gene Ksed_18290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_18290 
Symbol 
ID8373334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1900960 
End bp1902066 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content71% 
IMG OID644992086 
ProductUDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
Protein accessionYP_003149598 
Protein GI256825638 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.0723991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGAAT ACCTCCTCAT CATGCTCATC GCCGGGTCGG TGACCTTCGC GATCACACCG 
TTGGTGCGCT GGTTCGCCAT CCGCGCCGGG GCGATCACAC CGGTGCGCGG CCGCGACGTC
CACGTGATGC CCAAGCCCCG CCTGGGGGGA CTGGCGATGC TGGCGGGTCT GCTCGCGGCG
ACGCTCATGG CCGCGCGCCT GCCCTACCTC AGCCAGATCT TCGCCGACAC CCAGATCCAG
GGGATCCTGC TGGCCGCGGT CGTGGTCAGC CTGCTGGGGG CGGCTGACGA CCGGTGGGAC
CTGCACTGGG CGCTCAAGCT CGGAGGACAG CTCGCGGCGG CCACGGTGCT GGCAGCGTTC
GGCGTCACGC TGGTGAGCCT CCCCATCCAG GGCTACACGG TCCTGCCGGG CCCGGTCTCG
CTGGCGCTGA CCATCCTGCT GGTCGTGGCC ACCATGAACG CGGTGAACTT CGTGGACGGT
CTGGACGGAC TCGCGGCGGG CATGGTGGGC ATCGCCTCGG CGGCCTTCTT CGTGTGGAGC
TACGAGCTCT CGCACACCTA CGACCCCCCG AACGTGTTCT CGACGGCCAC CTTCATCACG
GCCGTCCTGG TGGGGGTGTG CGCCGGCTTC CTGCCCCACA ACTTCCACCC CTCCCGGTTG
TTCATGGGTG ATGCGGGGTC GCTGCTGCTG GGGCTGCTGG TCGCCGCAGC CACCATCTCG
TTGACCGGCA CGGTGGACCC CGCCGCCGTG GGGACGCCTT CGCAGACCGC CGCGGTGGTG
CTGCCGCTGG CGCTGCCGGT GGCCGTGATC GCCGTGCCGC TGGTGGACAT GGTGCTGGCG
GTGGTACGGC GCACCCGGGC CGGGCAGAAG CCGTGGGACG CCGATGCGCG CCACCTGCAC
CACCAGCTGC TGCGGCTGGG CCACTCCCAC CGGTCGGCCG TCCTGACCAT GTACCTGTGG
GCCGGTGGCG TCGCCGGGGG AGTGCTGGCC TTCAACTTCG CCCCGGAGTG GGCCGCCCTG
CTGCTGCTGG TGTCGCTGGT GGTGCTGGCG GCCCTGGTCA CCTGGGTGGT GCCGCGGCGG
CACGTCGCCC ACGGAGGAGG CTCGTGA
 
Protein sequence
MREYLLIMLI AGSVTFAITP LVRWFAIRAG AITPVRGRDV HVMPKPRLGG LAMLAGLLAA 
TLMAARLPYL SQIFADTQIQ GILLAAVVVS LLGAADDRWD LHWALKLGGQ LAAATVLAAF
GVTLVSLPIQ GYTVLPGPVS LALTILLVVA TMNAVNFVDG LDGLAAGMVG IASAAFFVWS
YELSHTYDPP NVFSTATFIT AVLVGVCAGF LPHNFHPSRL FMGDAGSLLL GLLVAAATIS
LTGTVDPAAV GTPSQTAAVV LPLALPVAVI AVPLVDMVLA VVRRTRAGQK PWDADARHLH
HQLLRLGHSH RSAVLTMYLW AGGVAGGVLA FNFAPEWAAL LLLVSLVVLA ALVTWVVPRR
HVAHGGGS