Gene Ksed_17970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17970 
Symbol 
ID8373302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1870379 
End bp1870705 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content72% 
IMG OID644992054 
ProductHelix-turn-helix protein 
Protein accessionYP_003149566 
Protein GI256825606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.162477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.719261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATCA TTCGACGCGA GGTCGGCGAC GTCCTGCGTG AGCGCCGTCG GCACCAGGGG 
CGCACCCTGC GCCAGGTGTC CTCGGACGCA GCCGTCTCCC TGGGCTACCT CAGCGAGGTG
GAGCGCGGGG AGAAGGAGGC CAGCTCGGAG ATGCTGGCCA CCATCTGCCG CGCACTGGAG
TTGCCGGTCT CGCAGATGCT GAACGACGTG GCCGTCCGAG TGGCCATCGC CGAGGCCGAG
GAGGCCGTCA ACGTGCCGGA CTCGCCGGCC AACATGCCGC TGGGGGGCCC GCCGGAGCAG
GTGCTCCGCC CGACCCCCGT CGGCTGA
 
Protein sequence
MVIIRREVGD VLRERRRHQG RTLRQVSSDA AVSLGYLSEV ERGEKEASSE MLATICRALE 
LPVSQMLNDV AVRVAIAEAE EAVNVPDSPA NMPLGGPPEQ VLRPTPVG