Gene Ksed_17590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17590 
Symbol 
ID8373264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1831367 
End bp1832347 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content69% 
IMG OID644992024 
Productsignal transduction histidine kinase 
Protein accessionYP_003149536 
Protein GI256825576 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.0109488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.353356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGCGA GGGAGCGGAT CAGCTGGACC GAACTGCTGC ACGGTGCGCT CCTGGTCCCG 
CTGTCGGTGC TGAACTTCGC CGTCCTGACG TTGGGGCTGC TGATGCCGGG CATGCTCGCC
ACGTCCAGTG GGCTCCTGGT CGTGTTCAGC ATCTTGGGAG TGGATCCGGC GACCGTCGAC
CCGGGCACGA CCGCGATCCA GCGTGACCCT CTCGCTCAGG TTCTGCTCTG CGTGCTCGGC
CTCGTTCTCC TGATCGCCGG CCTCTACGCC GTCACCCTCC TCGCGGAGGG GCAGCGCTAC
CTCGCCCGGA TGCTGATCAC CGAACCCGCC CCAGAGCTGT CCGCTCAGGT CGAAGGGCTC
ACCCGCTCCC GTGCCCGCGT CACCGACGCG TTCGACGCCG AACGCCGCAG GATCGAACGC
GACCTCCACG ACGGAGCCCA GCAGCGCCTC ACCGCGCTCG TGATGACACT CGGAACGATG
CGCTACCAGC ACGACCGCGG CCACGACGTC ACCGACCTCA TCGACCAGGC CGGCCACGAC
GCCCGCCGCG CCGTCGAGGA GCTCCGCCAG ATCGTGCACG ACATCTTCCC CGCCGCGCTG
CGCGAGAACG ACCTGACCGG TGCCCTCGAC GACCTCGCCG CCAGCACGGA GACCGCAGGC
ATCACCACGA CGGTCACCAT CGACCTCCCC TCCGAACTCC CGACCGACGT GCAAGTCGGG
GTCTACTTCG CGACCAGCGA ACTGTTCACC AACGTGCTCA AACACGCCCG CGCGACCAAC
GTTCGCCTCC TCGGCCACCA AACCGAGGAA GGTCGCATCT TCGTGACCGT CGAAGACGAC
GGAGCAGGCG GCGCGGATCC GGACGGCACC GGCCTGCTCG GCGTAATCGA CCGCATCGAG
ACGCTCGGCG GCCGGGTCCA CCTCGTCAGC CCGGTCGGCG GCCCGACCCG CATCAGTTTG
GAGGTCCCAT GCGCATCGTG A
 
Protein sequence
MRARERISWT ELLHGALLVP LSVLNFAVLT LGLLMPGMLA TSSGLLVVFS ILGVDPATVD 
PGTTAIQRDP LAQVLLCVLG LVLLIAGLYA VTLLAEGQRY LARMLITEPA PELSAQVEGL
TRSRARVTDA FDAERRRIER DLHDGAQQRL TALVMTLGTM RYQHDRGHDV TDLIDQAGHD
ARRAVEELRQ IVHDIFPAAL RENDLTGALD DLAASTETAG ITTTVTIDLP SELPTDVQVG
VYFATSELFT NVLKHARATN VRLLGHQTEE GRIFVTVEDD GAGGADPDGT GLLGVIDRIE
TLGGRVHLVS PVGGPTRISL EVPCAS