| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_17490 |
|---|
| Symbol | |
|---|
| ID | 8373254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 1818412 |
|---|
| End bp | 1819965 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644992014 |
|---|
| Product | GTP-binding proten HflX |
|---|
| Protein accession | YP_003149526 |
|---|
| Protein GI | 256825566 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2262] GTPases |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.106124 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.236778 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACA CCCCCACGTC CCCCGCCGAG TTCGAGCGCG AGGACCAGGT GAACACCGCG
ACGCCCCAGG ACCCCCGCGG GGTCGATGAG GTGGACGGGC CGCCGGCCCT GCGCCGCGCC
GCCGCCCTGT CGCAGGACCC CGACGGCTAC GACGACCGGG AGGGCGAGCA CTACGACGGT
GAGCAGTACG ACCGCGAGGA GCGGCGCGCG CTGCGCCGCA TCGACTCGCT CTCCACCGAG
CTCGAGGACA TCTCCGAGGT CGAGTACCGC CAGGTGCGGC TCGAACGCGT CGTGCTCGCC
CACGTGCAGA CCGAGGGCAC CGCCGAGGAG GCCGAGAACT CCCTGGCCGA GCTGGCCGCG
CTGGCCGAGA CGGCCGGGTC CACGGTGCTC ACCGGGGTGA TCCAGCGCCG TCAGAAGCCG
GACCCCGCCA CCTGGATGGG CTCGGGCAAG GCCGCAGAGC TCCGCGACAT CGTCGCGGCG
GAGGGGGCGG ACACCGTCAT CGCCGACGAC GAGCTGGCCC CCAGCCAGCG GCGTGCCCTG
GAGGACGTCA TCAAGGTGAA GGTGGTGGAC CGCACCGCTC TGATCCTGGA CATCTTCGCC
CAGCACGCGA AGTCCCGGGA GGGTCGTGCG CAGGTGGAGC TCGCGCAGCT GCAGTACCTG
CTGCCGCGCC TGCGTGGCTG GGGTGAGTCG ATGTCCCGCC AGGCCGGTGG ACGGGTCGCC
GGCGGTGAGG GCATCGGCTC CCGTGGACCC GGTGAGACGA AGATCGAGCT GGACCGCCGC
CGCATCAACA CCCAGATGGC CAAGCTGCGC AAGCAGATCG CGCAGATGAA GACGGTGCGC
GACACCAAGC GCTCCTCGCG CAAGGACCAC CAGGTGCCCT CCGTGGTGAT CGCGGGCTAC
ACCAACGCCG GCAAGTCCTC GCTGCTGAAC CGCCTGACCC GGGCCGGGGT GCTGGTGGAG
AACCAGCTGT TCGCCACGCT GGACCCGACC GTCCGGCGCA CCGAGACCGC CGACGGTCGC
GTGTTCACCC TCGCCGACAC CGTGGGGTTC GTGCGTTCGC TGCCGCACCA GCTGGTGGAG
GCCTTCCGCT CCACGCTGGA GGAGGTCGCC GACGCCGACC TCGTGCTGCA CGTCGTGGAC
GGCTCCCACC CGGACCCCGA GAACCAGATC TCCGCGGTGC GCGAGGTGCT CTCGGAGGTC
TTGGACGAGA AGGGCGCGGA CTCGATGAAC GAGATCATCG TCATCAACAA GGCCGATGCC
GCCGACCCCG AGGTGGTTGC CCGCCTGCTG CGCACGGAGA AGCGGTCGAT CGCCGTCTCC
GCCCGGACCG GTCAGGGCAT CACCGAGCTC CGTGAGCTGG TGGAGTCCGA GCTGCCGCGC
CCCGACATCG AGGTGGACGT GGTGGTGCCC TACGAGCGCG GCGACCTGGT GGCCCGCATC
CACTCCGAGG GCGAGGTGCT CGCCGAGCGC CACCTGCCCG AGGGCACGCA CCTGGTGGCG
CGCATCAACG CCGACCTCGC CGGGGCGCTG ACGCCGGTGG TGCAGGCGCG CTGA
|
|---|
| Protein sequence | MTHTPTSPAE FEREDQVNTA TPQDPRGVDE VDGPPALRRA AALSQDPDGY DDREGEHYDG
EQYDREERRA LRRIDSLSTE LEDISEVEYR QVRLERVVLA HVQTEGTAEE AENSLAELAA
LAETAGSTVL TGVIQRRQKP DPATWMGSGK AAELRDIVAA EGADTVIADD ELAPSQRRAL
EDVIKVKVVD RTALILDIFA QHAKSREGRA QVELAQLQYL LPRLRGWGES MSRQAGGRVA
GGEGIGSRGP GETKIELDRR RINTQMAKLR KQIAQMKTVR DTKRSSRKDH QVPSVVIAGY
TNAGKSSLLN RLTRAGVLVE NQLFATLDPT VRRTETADGR VFTLADTVGF VRSLPHQLVE
AFRSTLEEVA DADLVLHVVD GSHPDPENQI SAVREVLSEV LDEKGADSMN EIIVINKADA
ADPEVVARLL RTEKRSIAVS ARTGQGITEL RELVESELPR PDIEVDVVVP YERGDLVARI
HSEGEVLAER HLPEGTHLVA RINADLAGAL TPVVQAR
|
|---|
| |