Gene Ksed_17380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17380 
Symbol 
ID8373243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1802764 
End bp1803024 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content67% 
IMG OID644992003 
ProductSSU ribosomal protein S20P 
Protein accessionYP_003149515 
Protein GI256825555 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0268] Ribosomal protein S20 
TIGRFAM ID[TIGR00029] ribosomal protein S20 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value0.573431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00388054 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCGAACA TCAAGTCGCA GAAGAAGCGC GTTCTGACCA ACGCGAAGCG CACCGAGCGC 
AACCGCGCGT ACAAGTCGGA GCTGCGCACC TGGATCCGCA AGTTCCGTGC CGCCGCCGAG
TCGGGCGACG CCACCGCGGC GCAGGACGCG CTGCAGACGG CCAGCAAGAA GCTGGACAAG
GCCGTGAGCA AGGGCGTGAT CCACAAGAAC CAGGCCGCCA ACAAGAAGTC GGCCATGGCG
AAGCGGGCCG CGGCTCTCTG A
 
Protein sequence
MANIKSQKKR VLTNAKRTER NRAYKSELRT WIRKFRAAAE SGDATAAQDA LQTASKKLDK 
AVSKGVIHKN QAANKKSAMA KRAAAL