| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_16860 |
|---|
| Symbol | |
|---|
| ID | 8373192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 1747160 |
|---|
| End bp | 1748866 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644991954 |
|---|
| Product | phosphoenolpyruvate--protein phosphotransferase |
|---|
| Protein accession | YP_003149466 |
|---|
| Protein GI | 256825506 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
|---|
| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.0263256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.512489 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCCGCG TCCCCGCGAC CAGCACCCCG GAAGACCAGC CCCGCCAGCT CACCGGCACC
CCGGTGGTGC CGGGCGTGGT GCACGCCCCG GTGGTGTGGG CGCGGCCCCG CCCCGAGGCC
CCCGCCAGCG GCGCCGAACT GCCCGCGGGG GAGCGCGAGG CCGAGGCCGA GCGTCTGGCG
ACGGCGATCG AGGCCGTGGC CAGCCGCCTG GAGGAGCGCG CTGCGGCGGT CACGGGCGCG
GCGGCCGAGG TGCTGGCGGC CACGGCCGGC ATTGCGCGGG ACACCGGGTG GGCCAAGCAG
GCCCGTCAGG CCGTGGAGGC CGGGCAACCG GCCGCGGTGG CGACAACGCA CGCCATCGGG
GGCTTCATCG AGACCTTCGA GAAGCTCGGC GGGGTGATGG CCGAGCGCAC CACCGACCTG
CGGGACGTCC GTGACCGCGT GGTCGCAGAG CTCACCGGCC AGCCCGAGCC GGGTGTGCCC
ACGCCCGCCG AGCCGTCGGT GCTGTGCGCC GAGGACCTCG CCCCCGCCGA CACCGCGGGG
CTCGACCCGC AGCAGGTGGT GGCCATCGTC ACCAGCGCCG GCGGCCCGAC CAGCCACACC
TCGATCATCG CCCGGCAGCA CGGCATCCCC TGCGTGGTCG GGGTGGCCGG GCTCGAGGCG
CTGGAGGCGG GGGAGTCGGT GCTGGTGGAC GGGGGCGCCG GGACGCTCGA CCGGGGGGTC
GACGCCGAGG AGGCGGCGCG GCGGGTGGCG CAGGACGCCG ACCGGCGTGC CCGCATCGAG
GCGTGGTCGG GGCCGGCCCG CACGGCCGAC GGGACGGGCG TGGAGCTGCT GGCCAACGTG
CAGGACGGGG CCGGGGCGCG GGCCGCCGCG GCCGGGCACG CCCAGGGGGT GGGCCTGTTC
CGCACCGAGC TGCTCTTCCT GGGTGCACGT TCCGAACCCA CCGTGGACGA CCAAGCGGCG
CGCTACGCCG AGGTGTTCGG CGCGTTCGCC GGGCACAAGG TGGTGCTGCG CACCCTCGAT
GCGGGGTCGG ACAAGCCGCT GGCCTTCGCC ACCCTGCCCG ACGAGCCGAA CCCCGCCCTG
GGGGTGCGCG GGTACCGCCT GGCGCAGGTG GACCCGGGGC TGCTGGAGCG GCAGCTCGAT
GCGGTGGCGC GGGCCGCGTC GCAGGCCGGG GTGGACGCCG CCGACGCCTG GGTCATGGCC
CCGATGGTGG CGACCGTCGC CGAGGCGCGC GCGTTCGCCG AGCAGGTGCG CTCGCGGGGG
CTGCGGGCCG GAGTGATGGT GGAGGTGCCG GCGCTGGCGC TGCAGGCCGA GGCGCTGGTG
CGCGAGGTGG ACTTCGTCTC GATCGGCACG AACGACCTCG CGCAGTACAC GATGGCCGCC
GACCGGATGA CGGCCTCGCT GGCTGGGCTG ACCGATCCCT GGCAGCCGGC GGTGCTGCGG
CTGGTGGAGA TGACCGCACG GGCCGGTGCG GCGGCGGGGG CACCCGTGGG GGTCTGTGGC
GAGGCCGCGG CGGACCCGGA CCTGGCGTGC GTGCTGGTGG GCCTGGGCGT GAGTTCGCTG
TCGATGGCGG CCGGTGCCGT CAGCGCCGTG GGGGAGCGGC TGTCGCGGGC CACCGACGCG
CAGTGCCGCG CGGCGGCGGA GGCGGCCCTG GGCGCTGCGG ACCCGGCGGC GGCCCGCGAG
GCGGTGGCCG CGGTGCTGGA GGGTTGA
|
|---|
| Protein sequence | MPRVPATSTP EDQPRQLTGT PVVPGVVHAP VVWARPRPEA PASGAELPAG EREAEAERLA
TAIEAVASRL EERAAAVTGA AAEVLAATAG IARDTGWAKQ ARQAVEAGQP AAVATTHAIG
GFIETFEKLG GVMAERTTDL RDVRDRVVAE LTGQPEPGVP TPAEPSVLCA EDLAPADTAG
LDPQQVVAIV TSAGGPTSHT SIIARQHGIP CVVGVAGLEA LEAGESVLVD GGAGTLDRGV
DAEEAARRVA QDADRRARIE AWSGPARTAD GTGVELLANV QDGAGARAAA AGHAQGVGLF
RTELLFLGAR SEPTVDDQAA RYAEVFGAFA GHKVVLRTLD AGSDKPLAFA TLPDEPNPAL
GVRGYRLAQV DPGLLERQLD AVARAASQAG VDAADAWVMA PMVATVAEAR AFAEQVRSRG
LRAGVMVEVP ALALQAEALV REVDFVSIGT NDLAQYTMAA DRMTASLAGL TDPWQPAVLR
LVEMTARAGA AAGAPVGVCG EAAADPDLAC VLVGLGVSSL SMAAGAVSAV GERLSRATDA
QCRAAAEAAL GAADPAAARE AVAAVLEG
|
|---|
| |