Gene Ksed_16150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_16150 
Symbol 
ID8373121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1661135 
End bp1662889 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content75% 
IMG OID644991883 
Producthypothetical protein 
Protein accessionYP_003149395 
Protein GI256825435 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.0650546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.732328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACA GCACCCCGCC CCGCCACGGC ATCCAGGGCA GCTTCGAGGA CCTGGGCACG 
CCGCTGGCCG ACGTGACCTT CGTGGTCTTC GACCTGGAGA CCACGGGGAC CAGCTCGGCC
GACAGCGAGA TCACCGAGTT CGGGGCGGTC AAGGTGCGCG GCGGCGAGGT GGTTGGCGAG
TTCCAGACCC TGGTGCGCCC CGCCGCGGGC ATCCCCCCGT ACATCCAGGT GCTCACCGGC
ATCACGACGG CGATGGTCTC GGCCGCCCCC TCCATCGAGC AGGTCCTGCC GAACTTCCTG
GAGTTCGTGG GCGATGCGGT GCTCGTCGCC CACAACGCCC GCTTCGACAC CGCCTTCGTC
CGGCGCGCGT GCGAGCGGAC CGGCCGCCCG GCGCCCGGCA ACCCCGTGCT CGACACCGTC
CACCTCGCCC GGCAGCTGCT CCCCCGCCCC GAGGTGCCCA ACCACAAGCT CTCCACGCTG
GCGGCGTACT TCCGGGCCGA AACCACACCC TCCCACCGTG CGCTCGACGA CGCACGGGCC
ACCGTGGACG TGCTCCACGG GCTCATCGAG CGGGTGGGCC CCTTGGGTGT GCACTCGCTC
GAGGAGCTGC TGGCGTACAG CCGGCACGTG CCGGAGGCGC GGCGTCGCAA GCGCACCTTG
GCCGCCGACC TGCCTGAAGC CCCCGGCGTC TACCGCTTCC TCGACGCGGC CGGTGAGGTG
CTCTACGTGG GCACGGCGGT CAACATCCGC CGCCGGGTGT CCCAGTACTT CACGGCCTCG
GAGACCAGGC GGCGCATGGG GGACATGGTG CGCCTCGCCG AGCGCGTGGT GCCGATCGTG
TGCCCCACGG CACTGGAGGC CTCCGTGCGG GAGCTGCGCC TCATCGCCGA GCACCGGCCC
CGGTACAACC GCGCCGGGCT CAAGGGCGCC TCCCTGCCCT ACGTGCGCCT GACCGACGAA
CCCTTCCCCC GCCTGTCCGT GGTGCGCGCG GTCTCGGACG ACGCGGCGAC CCACATCGGC
CCCTTCCCCT CGGCGAGCGC CGCGAAGGAG GCGGTCCAGG CCCTCCACTC GGCCCTCCCC
CTGCGTCAGT GCACCAGCCG CATCACCGAG GCCTCCGCCG CCCGCGCCAC GACCGCCTGC
GCCCTGGCCG ACCTGGGCCG ATGCGGTGCG CCCTGCACCG GCGCCATGTC CCGCTCCGAG
TACGCGGAGG TCACCACGCG TGCGCGCGCT GCCCTGGCCA CCGACCACCG CGAGGCCTGG
CAGGCCCTGG CGGCCCGGAT GGACGAGCTC GCGGGCGCCG AACGGTACGA GGAGGCCAGG
GTGCTGCGGG ACGGCGCCCG CGCCTACCTG CGGGCAGCCG CCCGTCGCCA GCGGCACGAG
GCGCTGGCCG GTGTCCGTGA GCTGGTGGCC GCCGCCCCGA TGCGGGGTGG CGGCTGGGAG
CTGGTGTGCA TCCGCCACGG TCGCCTCGCC GGGTCGGCCC TGGCCCCCCG GGGTGTCGAC
CCCATGCCGG TCGTCGAGGC CCTCACCGCC ACGGCCGAGG TGGTCCGGGC ACGGACCGAC
GGCTCCCCCG CGGCACTGCC GGGTGAGACC GACCTGGTCC TGCGCTGGCT GGAGGCCGAG
GGGGTGCGCC TGGTCACCGC CTCGGACGGC TGGGCCACCC CGGTGCACTC CGCCGCCGCC
GTCACCGACC TGCTCGAGGA GGCCGTCGCC GCCGACCTGC CCTCGGCCCG GTCCCGCCGC
GGCCCCCGGC GCTAG
 
Protein sequence
MPHSTPPRHG IQGSFEDLGT PLADVTFVVF DLETTGTSSA DSEITEFGAV KVRGGEVVGE 
FQTLVRPAAG IPPYIQVLTG ITTAMVSAAP SIEQVLPNFL EFVGDAVLVA HNARFDTAFV
RRACERTGRP APGNPVLDTV HLARQLLPRP EVPNHKLSTL AAYFRAETTP SHRALDDARA
TVDVLHGLIE RVGPLGVHSL EELLAYSRHV PEARRRKRTL AADLPEAPGV YRFLDAAGEV
LYVGTAVNIR RRVSQYFTAS ETRRRMGDMV RLAERVVPIV CPTALEASVR ELRLIAEHRP
RYNRAGLKGA SLPYVRLTDE PFPRLSVVRA VSDDAATHIG PFPSASAAKE AVQALHSALP
LRQCTSRITE ASAARATTAC ALADLGRCGA PCTGAMSRSE YAEVTTRARA ALATDHREAW
QALAARMDEL AGAERYEEAR VLRDGARAYL RAAARRQRHE ALAGVRELVA AAPMRGGGWE
LVCIRHGRLA GSALAPRGVD PMPVVEALTA TAEVVRARTD GSPAALPGET DLVLRWLEAE
GVRLVTASDG WATPVHSAAA VTDLLEEAVA ADLPSARSRR GPRR